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Protein

Probable alpha-L-arabinofuranosidase A

Gene

abfA

Organism
Aspergillus oryzae (strain ATCC 42149 / RIB 40) (Yellow koji mold)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Alpha-L-arabinofuranosidase involved in the degradation of arabinoxylan, a major component of plant hemicellulose. Acts only on small linear 1,5-alpha-linked L-arabinofuranosyl oligosaccharides (By similarity).By similarity

Catalytic activityi

Hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides.

Pathwayi

GO - Molecular functioni

  1. alpha-L-arabinofuranosidase activity Source: UniProtKB

GO - Biological processi

  1. arabinan catabolic process Source: UniProtKB-UniPathway
  2. arabinose metabolic process Source: UniProtKB
  3. L-arabinose metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation

Enzyme and pathway databases

UniPathwayiUPA00667.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable alpha-L-arabinofuranosidase A (EC:3.2.1.55)
Short name:
ABF A
Short name:
Arabinosidase A
Gene namesi
Name:abfA
ORF Names:AO090124000023
OrganismiAspergillus oryzae (strain ATCC 42149 / RIB 40) (Yellow koji mold)
Taxonomic identifieri510516 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeEurotialesAspergillaceaeAspergillus
ProteomesiUP000006564 Componenti: Chromosome 5

Subcellular locationi

Secreted By similarity

GO - Cellular componenti

  1. extracellular region Source: UniProtKB
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525Sequence AnalysisAdd
BLAST
Chaini26 – 629604Probable alpha-L-arabinofuranosidase APRO_0000394599Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi36 – 361N-linked (GlcNAc...)Sequence Analysis
Glycosylationi51 – 511N-linked (GlcNAc...)Sequence Analysis
Glycosylationi140 – 1401N-linked (GlcNAc...)Sequence Analysis
Glycosylationi152 – 1521N-linked (GlcNAc...)Sequence Analysis
Glycosylationi168 – 1681N-linked (GlcNAc...)Sequence Analysis
Glycosylationi171 – 1711N-linked (GlcNAc...)Sequence Analysis
Glycosylationi260 – 2601N-linked (GlcNAc...)Sequence Analysis
Glycosylationi494 – 4941N-linked (GlcNAc...)Sequence Analysis
Glycosylationi534 – 5341N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Glycoprotein

Interactioni

Protein-protein interaction databases

STRINGi5062.CADAORAP00011588.

Structurei

3D structure databases

ProteinModelPortaliQ2U790.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 51 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG3534.
HOGENOMiHOG000115340.
KOiK01209.
OrthoDBiEOG725DS5.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR010720. Alpha-L-AF_C.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF06964. Alpha-L-AF_C. 1 hit.
[Graphical view]
SMARTiSM00813. Alpha-L-AF_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q2U790-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVALSTLSGL SALPFLFSLV QNVYGVSLEV STEKGNSSSP ILYGFMFEDI
60 70 80 90 100
NHSGDGGIYG QLLRNNGLQG SKPGLTAWAA VGDATIAVDA QNPLTEAIPH
110 120 130 140 150
SLKLDVKQGA SGAVGFTNEG YWGVPVDGSE FLNTFWIKGN FSGDITVRLV
160 170 180 190 200
GNNTGTEYGS TKISQSSNSS NFTKVLAKIP TKKAPDGAVL YELTVDGASV
210 220 230 240 250
GGSSLNFGLF ELFPQTYKSR SNGLKPQVAQ PLADMKGSFL RFPGGNNLEG
260 270 280 290 300
ASEARRWKWN ETIGPVENRP GRQGDWSYYN TDGLGLDEYF YWCEDMGLTP
310 320 330 340 350
VLGVWAGFAL ESGGNTPITG DALKPYIDDV LNELEYVLGD ASTKYGSLRA
360 370 380 390 400
SYGRKEPWKL TMVEIGNEDM LGGGCESYVE RFTAFSDAIH AAYPDLTIIA
410 420 430 440 450
STDQSSCLPS KLPEGAWVDY HNYNTADNLV KQFSQFDNKD RSVPYFIGEY
460 470 480 490 500
SCQQDNAWPF MQGSVAEAVY MIGIERNSDV VKMAAYAPLL QLVNSTQWTP
510 520 530 540 550
NLIAFTQNPS TVIETTSYYV QQMFSVNRGD TIHNVTSDSA FGPVYWVASS
560 570 580 590 600
ADDKYYVKLA NYGADTQEIT VTISGKTGGK LTVLADSDPK AFNSDTQTLV
610 620
TPSESDMKAT NGKFTFTLPA WSVGVLAAH
Length:629
Mass (Da):68,126
Last modified:June 14, 2010 - v2
Checksum:i9496AA78282C6549
GO

Sequence cautioni

The sequence BAE62575.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP007165 Genomic DNA. Translation: BAE62575.1. Sequence problems.
RefSeqiXP_001823708.2. XM_001823656.2.

Genome annotation databases

GeneIDi5995846.
KEGGiaor:AOR_1_46104.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP007165 Genomic DNA. Translation: BAE62575.1. Sequence problems.
RefSeqiXP_001823708.2. XM_001823656.2.

3D structure databases

ProteinModelPortaliQ2U790.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi5062.CADAORAP00011588.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi5995846.
KEGGiaor:AOR_1_46104.

Phylogenomic databases

eggNOGiCOG3534.
HOGENOMiHOG000115340.
KOiK01209.
OrthoDBiEOG725DS5.

Enzyme and pathway databases

UniPathwayiUPA00667.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR010720. Alpha-L-AF_C.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF06964. Alpha-L-AF_C. 1 hit.
[Graphical view]
SMARTiSM00813. Alpha-L-AF_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequencing and analysis of Aspergillus oryzae."
    Machida M., Asai K., Sano M., Tanaka T., Kumagai T., Terai G., Kusumoto K., Arima T., Akita O., Kashiwagi Y., Abe K., Gomi K., Horiuchi H., Kitamoto K., Kobayashi T., Takeuchi M., Denning D.W., Galagan J.E.
    , Nierman W.C., Yu J., Archer D.B., Bennett J.W., Bhatnagar D., Cleveland T.E., Fedorova N.D., Gotoh O., Horikawa H., Hosoyama A., Ichinomiya M., Igarashi R., Iwashita K., Juvvadi P.R., Kato M., Kato Y., Kin T., Kokubun A., Maeda H., Maeyama N., Maruyama J., Nagasaki H., Nakajima T., Oda K., Okada K., Paulsen I., Sakamoto K., Sawano T., Takahashi M., Takase K., Terabayashi Y., Wortman J.R., Yamada O., Yamagata Y., Anazawa H., Hata Y., Koide Y., Komori T., Koyama Y., Minetoki T., Suharnan S., Tanaka A., Isono K., Kuhara S., Ogasawara N., Kikuchi H.
    Nature 438:1157-1161(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 42149 / RIB 40.

Entry informationi

Entry nameiABFA_ASPOR
AccessioniPrimary (citable) accession number: Q2U790
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 14, 2010
Last sequence update: June 14, 2010
Last modified: January 6, 2015
This is version 51 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.