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Protein
Submitted name:

KillerRed

Gene
N/A
Organism
Anthomedusae sp. DC-2005
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  1. bioluminescence Source: InterPro
  2. generation of precursor metabolites and energy Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
KillerRedImported
OrganismiAnthomedusae sp. DC-2005Imported
Taxonomic identifieri328397 [NCBI]
Taxonomic lineageiEukaryotaMetazoaCnidariaHydrozoaHydroidaAnthomedusaeunclassified Anthomedusae

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2WIQX-ray2.00A/B2-237[»]
2WISX-ray2.35A/B2-237[»]
3A8SX-ray2.90A/B2-237[»]
3GB3X-ray1.75A/B1-237[»]
3GL4X-ray2.15A/B1-237[»]
3WCKX-ray2.30A/B/C/D/E/F/G/H2-237[»]
4B30X-ray2.10A/B1-64[»]
A/B68-237[»]
ProteinModelPortaliQ2TCH5.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ2TCH5.

Family & Domainsi

Family and domain databases

Gene3Di2.40.155.10. 1 hit.
InterProiIPR009017. GFP.
IPR011584. GFP-related.
IPR023413. GFP_like.
IPR000786. Green_fluorescent_prot.
[Graphical view]
PfamiPF01353. GFP. 1 hit.
[Graphical view]
PRINTSiPR01229. GFLUORESCENT.
SUPFAMiSSF54511. SSF54511. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2TCH5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEGGPALFQS DMTFKIFIDG EVNGQKFTIV ADGSSKFPHG DFNVHAVCET
60 70 80 90 100
GKLPMSWKPI CHLIQYGEPF FARYPDGISH FAQECFPEGL SIDRTVRFEN
110 120 130 140 150
DGTMTSHHTY ELDDTCVVSR ITVNCDGFQP DGPIMRDQLV DILPNETHMF
160 170 180 190 200
PHGPNAVRQL AFIGFTTADG GLMMGHFDSK MTFNGSRAIE IPGPHFVTII
210 220 230
TKQMRDTSDK RDHVCQREVA YAHSVPRITS AIGSDED
Length:237
Mass (Da):26,405
Last modified:January 24, 2006 - v1
Checksum:i971613C336C2C552
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY969116 mRNA. Translation: AAY40168.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY969116 mRNA. Translation: AAY40168.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2WIQX-ray2.00A/B2-237[»]
2WISX-ray2.35A/B2-237[»]
3A8SX-ray2.90A/B2-237[»]
3GB3X-ray1.75A/B1-237[»]
3GL4X-ray2.15A/B1-237[»]
3WCKX-ray2.30A/B/C/D/E/F/G/H2-237[»]
4B30X-ray2.10A/B1-64[»]
A/B68-237[»]
ProteinModelPortaliQ2TCH5.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiQ2TCH5.

Family and domain databases

Gene3Di2.40.155.10. 1 hit.
InterProiIPR009017. GFP.
IPR011584. GFP-related.
IPR023413. GFP_like.
IPR000786. Green_fluorescent_prot.
[Graphical view]
PfamiPF01353. GFP. 1 hit.
[Graphical view]
PRINTSiPR01229. GFLUORESCENT.
SUPFAMiSSF54511. SSF54511. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
  2. "Structural basis for the phototoxicity of the fluorescent protein KillerRed."
    Carpentier P., Violot S., Blanchoin L., Bourgeois D.
    FEBS Lett. 583:2839-2842(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 2-237.
  3. Cited for: X-RAY CRYSTALLOGRAPHY (1.75 ANGSTROMS).
  4. "Crystal structure analysis of the fluorescent protein KillerRed."
    Sakai N., Takemoto K., Matsuda T., Kitago Y., Ayabe T., Nagai T.
    Submitted (OCT-2009) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.90 ANGSTROMS) OF 2-237.
  5. "GFP-like phototransformation mechanisms in the cytotoxic fluorescent protein KillerRed unraveled by structural and spectroscopic investigations."
    de Rosny E., Carpentier P.
    J. Am. Chem. Soc. 134:18015-18021(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS) OF 1-64 AND 68-237.
  6. "SuperNova, a monomeric photosensitizing fluorescent protein for chromophore-assisted light inactivation."
    Takemoto K., Matsuda T., Sakai N., Fu D., Noda M., Uchiyama S., Kotera I., Arai Y., Horiuchi M., Fukui K., Ayabe T., Inagaki F., Suzuki H., Nagai T.
    Sci. Rep. 3:2629-2629(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) OF 2-237.

Entry informationi

Entry nameiQ2TCH5_9CNID
AccessioniPrimary (citable) accession number: Q2TCH5
Entry historyi
Integrated into UniProtKB/TrEMBL: January 24, 2006
Last sequence update: January 24, 2006
Last modified: January 7, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.