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Q2T9Y5 (Q2T9Y5_BOVIN) Unreviewed, UniProtKB/TrEMBL

Last modified March 6, 2013. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
DNA ligase RuleBase RU000617
EC=6.5.1.1 RuleBase RU000617
Gene names
Name:LIG3 EMBL AAI11208.1
OrganismBos taurus (Bovine) EMBL AAI11208.1
Taxonomic identifier9913 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Cetartiodactyla › Ruminantia › Pecora › Bovidae › Bovinae › Bos

Protein attributes

Sequence length943 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
Q2T9Y5 [UniParc].

Last modified January 24, 2006. Version 1.
Checksum: 05873FA748DA489F

FASTA943105,101
        10         20         30         40         50         60 
MTLAFKILFP PTLRVLRKKE LCLFREHRRP DIRHFGRWSE TVFCGYHLLQ RRKPVPSFQE 

        70         80         90        100        110        120 
SNLKLRATCL VYLPGSHVGL CSGPCEMAEQ RFCVDYAKRG TAGCKKCKEK IVKGVCRIGK 

       130        140        150        160        170        180 
VVPNPFSESG GDMKEWYHIK CMFEKQERAP ATTKKIEDLT ELEGWEELEE NEKEQISQHI 

       190        200        210        220        230        240 
ADLSSKATST PKKKAVVQAK LTATGQVASP VKGASFVTNS NPRKFSGFSA KPNNSGEAHS 

       250        260        270        280        290        300 
SPTPKTPKTS MSSSKCDPKH KDCLLREFRK LCAMVAENPS YNTKTQIIQD FLQKGSAGDG 

       310        320        330        340        350        360 
FHGDVYLTVK LLLPGVIKSV YNLNDKQIVK LFSRIFNCNS DDMTRDLEQG DVSETIRVFF 

       370        380        390        400        410        420 
EQSKSFPPAA KSLLTIQEVD EFLLRLSKLT KEDEQQQALQ DIASRCTAND LKCIIRLIKH 

       430        440        450        460        470        480 
DLKMNSGAKH VLDALDPNAY EAFKASRNLQ DVVERVLRNE QEVEKEPGQR RALSVQASLM 

       490        500        510        520        530        540 
TPVQPMLAEA CKSIEYAMKK CPNGMFSEIK YDGERVQVHK KGDHFSYFSR SLKPVLPHKV 

       550        560        570        580        590        600 
AHFKDFIPRA FPGGHSMILD SEVLLVDNRT GKPLPFGTLG VHKKAAFQDA NVCQFVFDCI 

       610        620        630        640        650        660 
YFNDVSLMDR PLCERRKLLH DNMVEIPNRI MFSEMKQVTK ASDLVDMINR VIQEGLEGLV 

       670        680        690        700        710        720 
LKDVKGTYEP GKRHWLKVKK DYLNEGAMAD TADLVVLGAF YGQGSKGGMM SIFLMGCYDP 

       730        740        750        760        770        780 
SSQKWCTVTK CAGGHDDATL ARLQTELDMV KISKDPSKIP NWLKINKIYY PDFIVPDPKK 

       790        800        810        820        830        840 
AAVWEITGAE FSKSEAHTAD GISIRFPRCT RIRDDKDWKS ATTLPQLKEL YQLSKERAAF 

       850        860        870        880        890        900 
AITAGDEGSS ATGGSSGENE GTSGPAVPHK APRASPKQPP TSAKKAGGKP GGCTSRGGNL 

       910        920        930        940 
PAAEPSPVRA GVKRKAPDVT PCQAKRRPAS KRRGRRAVPT GRR

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC111207 mRNA. Translation: AAI11208.1.
IPIIPI00905942.
RefSeqNP_001033196.1. NM_001038107.2.
UniGeneBt.25483.

3D structure databases

ProteinModelPortalQ2T9Y5.
SMRQ2T9Y5. Positions 87-202.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ2T9Y5.

Proteomic databases

PRIDEQ2T9Y5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID514719.
KEGGbta:514719.

Organism-specific databases

CTD3980.

Phylogenomic databases

HOGENOMHOG000007653.
HOVERGENHBG005515.
KOK10776.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.30.1740.10. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
IPR001510. Znf_PARP.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
PF00645. zf-PARP. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
SSF117018. SSF117018. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
PS00347. PARP_ZN_FINGER_1. 1 hit.
PS50064. PARP_ZN_FINGER_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20871477.

Entry information

Entry nameQ2T9Y5_BOVIN
AccessionPrimary (citable) accession number: Q2T9Y5
Entry history
Integrated into UniProtKB/TrEMBL: January 24, 2006
Last sequence update: January 24, 2006
Last modified: March 6, 2013
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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