Skip Header

Contribute Send feedback
Read comments (0) or add your own

Unreviewed, UniProtKB/TrEMBL Q2T9L5 (Q2T9L5_HUMAN)

Last modified January 19, 2010. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

Hide | Top

Names and origin

Protein namesSubmitted name:
    SOX17 protein EMBL AAI11366.1
Gene names
Name: SOX17 EMBL AAI11366.1
OrganismHomo sapiens (Human) EMBL AAI11366.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Hide | Top

Protein attributes

Sequence length162 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level.

Hide | Top

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue1621 EMBL AAI11366.1

Hide | Top

Sequences

Sequence LengthMass (Da)Tools
Q2T9L5-1 [UniParc].

Last modified January 24, 2006. Version 1.
Checksum: C7AEC5A220C58B29

FASTA16217,957
        10         20         30         40         50         60 
MSSPDAGYAS DDQSQTQSAL PAVMAGLGPC PWAESLSPIG DMKVKGEAPA NSGAPAGAAG 

        70         80         90        100        110        120 
RAKGESRIRR PMNAFMVWAK DERKRLAQQN PDLHNAELSK MLGKSWKALT LAEKRPFVEE 

       130        140        150        160 
AERLRVQHMQ DHPNYKYRPR RRKQVKRLKR VEGGFLHGLA EP

« Hide

Hide | Top

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Embryonic stem cells EMBL AAI11366.1 and Pancreas EMBL AAH30209.1.
+Additional computationally mapped references.

Hide | Top

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC030209 mRNA. Translation: AAH30209.1.
BC111365 mRNA. Translation: AAI11366.1.
IPIIPI00007874.
UniGeneHs.98367

3D structure databases

SMRQ2T9L5. Positions 62-139.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ2T9L5.

Genome annotation databases

EnsemblENST00000297316; ENSP00000297316; ENSG00000164736; Homo sapiens. [Genome view]

Organism-specific databases

HGNCHGNC:18122. SOX17.
GenAtlasSearch...

Phylogenomic databases

HOVERGENQ2T9L5.

Gene expression databases

ArrayExpressQ2T9L5.
BgeeQ2T9L5.

Family and domain databases

InterProIPR000910. HMG_HMG1/HMG2.
IPR009071. HMG_superfamily.
[Graphical view]
Gene3DG3DSA:1.10.30.10. HMG-box. 1 hit.
PfamPF00505. HMG_box. 1 hit.
[Graphical view]
SMARTSM00398. HMG. 1 hit.
[Graphical view]
PROSITEPS50118. HMG_BOX_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Hide | Top

Entry information

Entry nameQ2T9L5_HUMAN
AccessionPrimary (citable) accession number: Q2T9L5
Entry history
Integrated into UniProtKB/TrEMBL: January 24, 2006
Last sequence update: January 24, 2006
Last modified: January 19, 2010
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information