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Q2T8T4 (Q2T8T4_BURTA) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:BTH_II0213
OrganismBurkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) [Complete proteome] [HAMAP] EMBL ABC35156.1
Taxonomic identifier271848 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiapseudomallei group

Protein attributes

Sequence length881 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q2T8T4 [UniParc].

Last modified January 24, 2006. Version 1.
Checksum: 7167E0FD73DC4F88

FASTA88193,609
        10         20         30         40         50         60 
MSAKHLGFKQ AVLVGSLAAL ACAAFLPAHA SAAEAFGSPG ATAVRGPSAK SFLGTAVNGA 

        70         80         90        100        110        120 
SRVYFTGYRG ILSEVYYPVL DTPESVDLQF LVGDAGKTFV DEEKQQAYSA VQTDTRTMSW 

       130        140        150        160        170        180 
QVTTSNGSHN WQIRKIIFAD PNYNAIVQRV TFTALNGHKV GDFNLYLLSK PYLDNAGGGN 

       190        200        210        220        230        240 
AAQTVSGSGG TALVANHNSR YSALVTSRPW KVVNGVGMTS NGFVGQSDGW TDLLGGTADK 

       250        260        270        280        290        300 
TMDWTFSSAT NGNVAQTGWI DLGDPSATSV SFDVVLGFGG TQDQALGDAN TVLGGDLAGE 

       310        320        330        340        350        360 
QQQYDTAWHN YAAGLSSQNG AADDGYYLAA MTLKTMQDKS NGAMIAGIGT PWGETQGDAN 

       370        380        390        400        410        420 
AGGYHLVWPR DLFKFANALT TAGDTSSATS VVNYLFNTLQ QTTNCGIAEY NASGCAQGYS 

       430        440        450        460        470        480 
RIGRFPQNAW VNGWPYWQGT QMDEQAMPII LAWRLGPSVF NPLWPKIKLT ADYIVNTGPW 

       490        500        510        520        530        540 
TYQERWEENA GYSPSTIAAE IAGLVTAADI ATQNGDTASA ARYLSAADYW QENVAAWTYT 

       550        560        570        580        590        600 
SSGTFGNGSY YIRINPAGRS GTGTDRASFA PTAGPDTPQT LTVKNGGGSH DARRVVDGGF 

       610        620        630        640        650        660 
FELVRMGVKR ATDPTIVNTI SVYDSVLGQT LSLANAPALS PNAWFRYNFD GYGEHNDGSD 

       670        680        690        700        710        720 
FDGTGAGRLW PIFTAERGMV EIARQGNGNA GSAYFSTLKQ LTTPEGFLPE QVWSNSTTLP 

       730        740        750        760        770        780 
DGWAVTTPAG YTPGQPTKSM APLNWAMGEY ISLLASIQAG RIVDVPSVVC ARYSNCVAPP 

       790        800        810        820        830        840 
QSGQVPVAVN VNASTQLGQQ MYVTGNVAAL GNWNTDLGIP VDPANYPVWS NTVNLPAAQA 

       850        860        870        880 
IQYKYYRKNA DGSVTWENGS GNRQLQTPAS GTLTLNDQVS W 

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References

[1]"Bacterial genome adaptation to niches: divergence of the potential virulence genes in three Burkholderia species of different survival strategies."
Kim H.S., Schell M.A., Yu Y., Ulrich R.L., Sarria S.H., Nierman W.C., DeShazer D.
BMC Genomics 6:174-174(2005) [PubMed: 16336651] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: E264 / ATCC 700388 / DSM 13276 / CIP 106301.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000085 Genomic DNA. Translation: ABC35156.1.
RefSeqYP_438415.1. NC_007650.1.

3D structure databases

ProteinModelPortalQ2T8T4.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ2T8T4.

Protein family/group databases

CAZyCBM20. Carbohydrate-Binding Module Family 20.
GH15. Glycoside Hydrolase Family 15.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3844896.
GenomeReviewsGene locus BTH_II0213 in contig CP000085_GR.
KEGGbte:BTH_II0213.
PATRIC19297812. VBIBurTha36512_0237.
TIGRBTH_II0213.

Phylogenomic databases

eggNOGCOG3387.
HOGENOMHBG290978.
OMARWEENAG.
ProtClustDBCLSK901426.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015220. Glucodextran_N.
IPR011013. Glyco_hydro-type_carb-bd.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR011613. Glyco_hydro_15.
IPR013783. Ig-like_fold.
[Graphical view]
Gene3DG3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit.
G3DSA:2.70.98.10. Glyco_hydro_42_D5. 1 hit.
G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
KOK01178.
PfamPF00686. CBM_20. 1 hit.
PF09137. Glucodextran_N. 1 hit.
PF00723. Glyco_hydro_15. 1 hit.
[Graphical view]
SMARTSM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMSSF49452. CBD_4. 1 hit.
SSF74650. Gal_mut_like. 1 hit.
SSF48208. Glyco_trans_6hp. 1 hit.
PROSITEPS51166. CBM20. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2T8T4_BURTA
AccessionPrimary (citable) accession number: Q2T8T4
Entry history
Integrated into UniProtKB/TrEMBL: January 24, 2006
Last sequence update: January 24, 2006
Last modified: January 25, 2012
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)