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Q2T6R2 (GLGA_BURTA) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:BTH_II0940
OrganismBurkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) [Complete proteome] [HAMAP]
Taxonomic identifier271848 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiapseudomallei group

Protein attributes

Sequence length533 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Sequence caution

The sequence ABC33934.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 533533Glycogen synthase HAMAP-Rule MF_00484
PRO_0000241790

Sites

Binding site121ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q2T6R2 [UniParc].

Last modified June 27, 2006. Version 2.
Checksum: D5E03E9D51985633

FASTA53357,466
        10         20         30         40         50         60 
MFVASEAFPL AKTGGLADVC ASLPKALRAL GCDVRVLMPG YAQALDRVLR PRVVAELGEV 

        70         80         90        100        110        120 
LPGAAVRIIA GSMPDSGVPV WLLDCPSLYR RAGSLYCGPD DADWADNAYR FGLLCQVAAR 

       130        140        150        160        170        180 
VALGAAGLRW RPDVVHAHDW HGGLVALLTR GAGDARPKTV FTIHNAAFQG NFALDDAARI 

       190        200        210        220        230        240 
GLPADALSVD GVEFYGQLSF LKAGARYADR LTTVSPTYAG EIQTAEFGCG LEGLYAARRD 

       250        260        270        280        290        300 
QLSGIMNGID TELWNPATDR WLPQPYSIDD MGGKAGCKAA LQQELGLCAD ARAPLVASVC 

       310        320        330        340        350        360 
RLTSQKMSDI VLERLPEQLA QHPRMQFALH GRGDRALEQG FDALAAQYPR RVAVRIGYDE 

       370        380        390        400        410        420 
TLAHRIHAGA DILLHGARFE PCGLTQLYAM RYGTIPIVRR VGGLADSVVD LDTLAPHSED 

       430        440        450        460        470        480 
ATGFVFDAPT GDAMSEALRR CVNLHDARPG VWSALCRLAM ARDSSWSRSA RAYLDLYAAL 

       490        500        510        520        530 
TPRRRVEASD EARGAAAALA RADAASGRRR RAPEQSERLR QERLARQVAL ASK 

« Hide

References

[1]"Bacterial genome adaptation to niches: divergence of the potential virulence genes in three Burkholderia species of different survival strategies."
Kim H.S., Schell M.A., Yu Y., Ulrich R.L., Sarria S.H., Nierman W.C., DeShazer D.
BMC Genomics 6:174-174(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: E264 / ATCC 700388 / DSM 13276 / CIP 106301.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000085 Genomic DNA. Translation: ABC33934.1. Different initiation.
RefSeqYP_439137.1. NC_007650.1.

3D structure databases

ProteinModelPortalQ2T6R2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING271848.BTH_II0940.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABC33934; ABC33934; BTH_II0940.
GeneID3844508.
KEGGbte:BTH_II0940.
PATRIC19299455. VBIBurTha36512_1057.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294941.
KOK00703.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycBTHA271848:GJMY-4283-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_BURTA
AccessionPrimary (citable) accession number: Q2T6R2
Entry history
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: June 27, 2006
Last modified: February 19, 2014
This is version 47 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways