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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

gabT

Organism
Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciBTHA271848:GJMY-5462-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported (EC:2.6.1.19Imported)
Submitted name:
4-aminobutyrate transaminaseImported (EC:2.6.1.19Imported)
Gene namesi
Name:gabTImported
Ordered Locus Names:BTH_II2119Imported
ORF Names:DR63_1316Imported
OrganismiBurkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)Imported
Taxonomic identifieri271848 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiapseudomallei group
ProteomesiUP000001930 Componenti: Chromosome II

Structurei

3D structure databases

ProteinModelPortaliQ2T3E2.
SMRiQ2T3E2. Positions 2-422.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
OMAiNLCAEAN.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2T3E2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNNADLHARK NAATPRGVGV MCDFYAARAE NAELWDVEGR RFIDFAAGIA
60 70 80 90 100
VLNTGHRHPK IVKAIAEQLE QFTHTAYQIV PYASYVELAE KINARAPIAQ
110 120 130 140 150
PKKTAFFTTG AEAVENAVKI ARAYTGRPGV IAFAGGFHGR TMMGMALTGK
160 170 180 190 200
VAPYKIGFGP FPGDVFHAPY PNALRGVTSA DSIAAVETLF KADIDPKRVA
210 220 230 240 250
AIIFEPVQGE GGFNPAPAEF VRALRKLCDA HGILLIADEV QTGFARTGKL
260 270 280 290 300
FAMEHYDVSA DLMTIAKSLA GGMPLSGVVG RADVMDAAAP GGLGGTYAGN
310 320 330 340 350
PLAVAAAHAV LDVIDEEKLA ERAAVLGDKL KAKLAALRAD VPQIADVRGP
360 370 380 390 400
GAMVAAEFVD PDTRASDAAF TKRVQTLALE RGLLLLICGV DANVIRFLFP
410 420
LTIQDAVFDE ALGILESVLK EAVGVPA
Length:427
Mass (Da):45,059
Last modified:January 24, 2006 - v1
Checksum:i063EC3D835F720BB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000085 Genomic DNA. Translation: ABC36175.1.
CP008785 Genomic DNA. Translation: AIP27179.1.
RefSeqiWP_009894093.1. NZ_CM000439.1.

Genome annotation databases

EnsemblBacteriaiABC36175; ABC36175; BTH_II2119.
PATRICi19302026. VBIBurTha36512_2335.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000085 Genomic DNA. Translation: ABC36175.1.
CP008785 Genomic DNA. Translation: AIP27179.1.
RefSeqiWP_009894093.1. NZ_CM000439.1.

3D structure databases

ProteinModelPortaliQ2T3E2.
SMRiQ2T3E2. Positions 2-422.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABC36175; ABC36175; BTH_II2119.
PATRICi19302026. VBIBurTha36512_2335.

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
OMAiNLCAEAN.
OrthoDBiEOG6QVRHN.

Enzyme and pathway databases

BioCyciBTHA271848:GJMY-5462-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Bacterial genome adaptation to niches: divergence of the potential virulence genes in three Burkholderia species of different survival strategies."
    Kim H.S., Schell M.A., Yu Y., Ulrich R.L., Sarria S.H., Nierman W.C., DeShazer D.
    BMC Genomics 6:174-174(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: E264Imported and E264 / ATCC 700388 / DSM 13276 / CIP 106301Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: E264.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: E264Imported.

Entry informationi

Entry nameiQ2T3E2_BURTA
AccessioniPrimary (citable) accession number: Q2T3E2
Entry historyi
Integrated into UniProtKB/TrEMBL: January 24, 2006
Last sequence update: January 24, 2006
Last modified: July 22, 2015
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.