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Protein
Submitted name:

Ribose operon repressor, putative

Gene

BTH_I0812

Organism
Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi12 – 31H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Ribose operon repressor, putativeImported
Gene namesi
Ordered Locus Names:BTH_I0812Imported
ORF Names:DR63_2588Imported
OrganismiBurkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264)Imported
Taxonomic identifieri271848 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiapseudomallei group
Proteomesi
  • UP000001930 Componenti: Chromosome I

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3EGCX-ray2.35A/B/C/D/E/F61-343[»]
ProteinModelPortaliQ2T0D1.
SMRiQ2T0D1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini10 – 64HTH lacI-type DNA-bindingInterPro annotationAdd BLAST55

Phylogenomic databases

HOGENOMiHOG000220179.
OMAiAFNDRCA.
OrthoDBiPOG091H01VT.

Family and domain databases

CDDicd01392. HTH_LacI. 1 hit.
InterProiView protein in InterPro
IPR000843. HTH_LacI.
IPR010982. Lambda_DNA-bd_dom.
IPR001761. Peripla_BP/Lac1_sug-bd_dom.
IPR028082. Peripla_BP_I.
PfamiView protein in Pfam
PF00356. LacI. 1 hit.
PF00532. Peripla_BP_1. 1 hit.
SMARTiView protein in SMART
SM00354. HTH_LACI. 1 hit.
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEiView protein in PROSITE
PS50932. HTH_LACI_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2T0D1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRKSHSHTV TLKDVAREAE VSYQTVSRAI NGYDEISAET REKVLDVCRR
60 70 80 90 100
LGYRPNRLAG SLRSKRSNVV GLIVSDIENV FFAEVASGVE SEARHKGYSV
110 120 130 140 150
LLANTAEDIV REREAVGQFF ERRVDGLILA PSEGEHDYLR TELPKTFPIV
160 170 180 190 200
AVNRELRIPG CGAVLSENVR GARTAVEYLI ARGHTRIGAI VGSAGLMTSR
210 220 230 240 250
ERLKGFRAAM SAAGLPVRQE WIAAGGVRAD NGRDGAIKVL TGADRPTALL
260 270 280 290 300
TSSHRITEGA MQALNVLGLR YGPDVEIVSF DNLPWMAFLD PPLPVVEQPT
310 320 330 340
RRIGQEAMRM LIHMIEGTGN ATEMRLQTRF VTHVGQDLSV EAE
Length:343
Mass (Da):37,597
Last modified:January 24, 2006 - v1
Checksum:i4BD7A36613CD24DE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000086 Genomic DNA. Translation: ABC37136.1.
CP008785 Genomic DNA. Translation: AIP25487.1.
RefSeqiWP_011401878.1. NZ_CM000438.1.

Genome annotation databases

EnsemblBacteriaiABC37136; ABC37136; BTH_I0812.
KEGGibte:BTH_I0812.

Similar proteinsi

Entry informationi

Entry nameiQ2T0D1_BURTA
AccessioniPrimary (citable) accession number: Q2T0D1
Entry historyiIntegrated into UniProtKB/TrEMBL: January 24, 2006
Last sequence update: January 24, 2006
Last modified: August 30, 2017
This is version 82 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported