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Reviewed, UniProtKB/Swiss-Prot Q2SY74 (RNPH_BURTA)

Last modified February 9, 2010. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Ribonuclease PH
      Short name=RNase PH
    EC=2.7.7.56
Alternative name(s):
    tRNA nucleotidyltransferase
Gene names
Name: rph
Ordered Locus Names: BTH_I1584
OrganismBurkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) [Complete proteome] [HAMAP]
Taxonomic identifier271848 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiapseudomallei group

Protein attributes

Sequence length243 AA.
Sequence statusComplete.
Protein existenceInferred from homology.

General annotation (Comments)

Function

Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates By similarity. HAMAP MF_00564

Catalytic activity

tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate. HAMAP MF_00564

Sequence similarities

Belongs to the RNase PH family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 243243Ribonuclease PH HAMAP MF_00564
PRO_1000024791

Sequences

Sequence LengthMass (Da)Tools
Q2SY74-1 [UniParc].

Last modified January 24, 2006. Version 1.
Checksum: 0D77F5A3603C260A

FASTA24326,034
        10         20         30         40         50         60 
MTNSSPRPSG RRADQLRDVR ITRHYTKHAE GSVLVEFGET KVICTASVVE RVPEFLRERG 

        70         80         90        100        110        120 
QGWLTAEYGM LPRATHTRSD REAARGKQTG RTQEIQRLIG RALRAVFDLN ALGPRTLHLD 

       130        140        150        160        170        180 
CDVIQADGGT RTASITGAFV AAHDAVTKLV AAGKIARSPI TDYVAAISVG VFGGAPVLDL 

       190        200        210        220        230        240 
DYDEDSACDT DMNVVMTGAG GFVEVQGTAE GVPFSRAEMN ALLDLAQAGI GELVRLQRAA 


LEA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000086 Genomic DNA. Translation: ABC37325.1.
RefSeqYP_442125.1.

3D structure databases

SMRQ2SY74. Positions 7-241.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ2SY74.

Genome annotation databases

GeneID3848958.
GenomeReviewsGene locus BTH_I1584 in contig CP000086_GR.
KEGGbte:BTH_I1584.
TIGRBTH_I1584.

Phylogenomic databases

eggNOGCOG0689.
HOGENOMHBG737187.
OMAMLPRATG.

Enzyme and pathway databases

BioCycBTHA271848:BTH_I1584-MONOMER.

Family and domain databases

HAMAPMF_00564. RNase_PH.
[Tree]
InterProIPR001247. ExoRNase_PH_dom1.
IPR015847. ExoRNase_PH_dom2.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR002381. RNase_PH_bac-type.
IPR018336. RNase_PH_CS.
[Graphical view]
PfamPF01138. RNase_PH. 1 hit.
PF03725. RNase_PH_C. 1 hit.
[Graphical view]
TIGRFAMsTIGR01966. RNasePH. 1 hit.
PROSITEPS01277. RIBONUCLEASE_PH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRNPH_BURTA
AccessionPrimary (citable) accession number: Q2SY74
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: January 24, 2006
Last modified: February 9, 2010
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents