Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q2SN93 (Q2SN93_HAHCH) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:HCH_00996 EMBL ABC27881.1
OrganismHahella chejuensis (strain KCTC 2396) [Complete proteome] [HAMAP] EMBL ABC27881.1
Taxonomic identifier349521 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaOceanospirillalesHahellaceaeHahella

Protein attributes

Sequence length554 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q2SN93 [UniParc].

Last modified January 24, 2006. Version 1.
Checksum: FF53E5CD22F39182

FASTA55461,311
        10         20         30         40         50         60 
MSKTKKIAKA SLETMYRVFT IPEAPNSTLG RIDQKISQNL AGFLQDHIVA VEKDLSEMEK 

        70         80         90        100        110        120 
DFAESRIPED PVFVSEQTQF LLDKLVSQSV HTASPSFIGH MTSALPYFML PLSKIMIALN 

       130        140        150        160        170        180 
QNLVKTETSK AFTPLERQVI GMMHRLVYDR DDAYYHEWMH NSSVALGSMC SGGTVANITA 

       190        200        210        220        230        240 
LWVARNLCFP ADSVFKGVRR EGMFKALKHY GYEGAAVLVS KRGHYSLSKS ADLLGLGSDN 

       250        260        270        280        290        300 
IIAIPTGANN KIDLQALRAT CEKLRDANVR VISLVGIAGT TETGNIDPLE DMAAIAKEFN 

       310        320        330        340        350        360 
TYFHVDAAWG GPTLFSNNYK HLLKGIELAD SVTMDAHKQL YVPMGAGLVV FKTPSTSNAI 

       370        380        390        400        410        420 
EHHAQYIIRQ GSRDLGSKTL EGSRPGMAML IQSGLKIIGR TGYEILIDLG IEKAKTFAAM 

       430        440        450        460        470        480 
IDQADDFELV SEPELNILTY RYHPVWVRQA FEFADEERRQ AINDCLSRIT KGIQKTQRAR 

       490        500        510        520        530        540 
GKAFVSRTRL NPAAYDGQAC VVFRVVLANP LTTVEILQDI LEEQRAIAAE DILSERMDEL 

       550 
RNLCAIPTAK VAAS 

« Hide

References

[1]"Genomic blueprint of Hahella chejuensis, a marine microbe producing an algicidal agent."
Jeong H., Yim J.H., Lee C., Choi S.H., Park Y.K., Yoon S.H., Hur C.G., Kang H.Y., Kim D., Lee H.H., Park K.H., Park S.H., Park H.S., Lee H.K., Oh T.K., Kim J.F.
Nucleic Acids Res. 33:7066-7073(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KCTC 2396 EMBL ABC27881.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000155 Genomic DNA. Translation: ABC27881.1.
RefSeqYP_432306.1. NC_007645.1.

3D structure databases

ProteinModelPortalQ2SN93.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING349521.HCH_00996.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3838036.
KEGGhch:HCH_00996.
PATRIC22083040. VBIHahChe29232_0928.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000282553.
KOK01580.
OMAALGAFCS.
OrthoDBEOG6MSRZP.
ProtClustDBCLSK874231.

Enzyme and pathway databases

BioCycHCHE349521:GHAL-959-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ2SN93_HAHCH
AccessionPrimary (citable) accession number: Q2SN93
Entry history
Integrated into UniProtKB/TrEMBL: January 24, 2006
Last sequence update: January 24, 2006
Last modified: April 16, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)