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Q2SLV0

- TYPH_HAHCH

UniProt

Q2SLV0 - TYPH_HAHCH

Protein

Putative thymidine phosphorylase

Gene

HCH_01516

Organism
Hahella chejuensis (strain KCTC 2396)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 60 (01 Oct 2014)
      Sequence version 1 (24 Jan 2006)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Thymidine + phosphate = thymine + 2-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

    GO - Molecular functioni

    1. phosphorylase activity Source: InterPro
    2. thymidine phosphorylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. pyrimidine nucleobase metabolic process Source: InterPro
    2. pyrimidine nucleoside metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Enzyme and pathway databases

    BioCyciHCHE349521:GHAL-1454-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative thymidine phosphorylaseUniRule annotation (EC:2.4.2.4UniRule annotation)
    Alternative name(s):
    TdRPaseUniRule annotation
    Gene namesi
    Ordered Locus Names:HCH_01516
    OrganismiHahella chejuensis (strain KCTC 2396)
    Taxonomic identifieri349521 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaOceanospirillalesHahellaceaeHahella
    ProteomesiUP000000238: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 505505Putative thymidine phosphorylasePRO_0000314699Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi349521.HCH_01516.

    Structurei

    3D structure databases

    ProteinModelPortaliQ2SLV0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0213.
    HOGENOMiHOG000252767.
    KOiK00758.
    OMAiITNMNEP.
    OrthoDBiEOG61ZTGG.

    Family and domain databases

    Gene3Di3.40.1030.10. 1 hit.
    3.90.1170.30. 1 hit.
    HAMAPiMF_00703. Thymid_phosp_2.
    InterProiIPR000312. Glycosyl_Trfase_fam3.
    IPR017459. Glycosyl_Trfase_fam3_N_dom.
    IPR013102. PYNP_C.
    IPR000053. Pyrmidine_PPase.
    IPR017872. Pyrmidine_PPase_CS.
    IPR028579. Thym_Pase_Put.
    IPR013466. Thymidine/AMP_Pase.
    [Graphical view]
    PANTHERiPTHR10515. PTHR10515. 1 hit.
    PfamiPF02885. Glycos_trans_3N. 1 hit.
    PF00591. Glycos_transf_3. 1 hit.
    PF07831. PYNP_C. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000478. TP_PyNP. 1 hit.
    SMARTiSM00941. PYNP_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF47648. SSF47648. 1 hit.
    SSF52418. SSF52418. 1 hit.
    SSF54680. SSF54680. 1 hit.
    TIGRFAMsiTIGR02645. ARCH_P_rylase. 1 hit.
    PROSITEiPS00647. THYMID_PHOSPHORYLASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q2SLV0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQQRELNYLF LKRIGINTHQ EPVVYMRQDC HVCRSEGFNA HSRVRVTTNK    50
    RSIIATVHQV TDGWLSHQEA GLSDAAWRLL EAEDGEVAYF SHTKAVDSMS 100
    HVRGKLYGAS LTQESADEVV KDVAGGLYSD VQLAAFVTAC AGSRLNQDEV 150
    AALTSAMVKV GQRIDWGTSP IMDKHCVGGL PGNRTTPIVV AIVTACGLRM 200
    PKTSSRAITS PAGTADTMET MAPVNLTLAQ MKKVVEQEGG CIAWGGSVSL 250
    SPADDVLIRI ERALDLDSEG QLVASVISKK VAAGSTHVLI DIPIGMTAKV 300
    RSPEYAERLA SHMRYTGVKL GIQVEAMFTD GAQPVGRGIG PALEARDILA 350
    VLRNQAEAPA DLRVRALTLA GRLLEIGGVA SHGAGVARAR ETLESGAALH 400
    KFMAICEAQG GFREPALAPH CYEATADRVG VVSFVNNRFV AKLAKLAGAP 450
    SNSSAGVDFH VKLGQKVRVG EPLFSIYAEA PGELAYALDF LRDHPNEIRI 500
    EEESL 505
    Length:505
    Mass (Da):54,055
    Last modified:January 24, 2006 - v1
    Checksum:iA7F6F18E58002A9E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000155 Genomic DNA. Translation: ABC28374.1.
    RefSeqiYP_432799.1. NC_007645.1.

    Genome annotation databases

    EnsemblBacteriaiABC28374; ABC28374; HCH_01516.
    GeneIDi3838842.
    KEGGihch:HCH_01516.
    PATRICi22083994. VBIHahChe29232_1403.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000155 Genomic DNA. Translation: ABC28374.1 .
    RefSeqi YP_432799.1. NC_007645.1.

    3D structure databases

    ProteinModelPortali Q2SLV0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 349521.HCH_01516.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABC28374 ; ABC28374 ; HCH_01516 .
    GeneIDi 3838842.
    KEGGi hch:HCH_01516.
    PATRICi 22083994. VBIHahChe29232_1403.

    Phylogenomic databases

    eggNOGi COG0213.
    HOGENOMi HOG000252767.
    KOi K00758.
    OMAi ITNMNEP.
    OrthoDBi EOG61ZTGG.

    Enzyme and pathway databases

    BioCyci HCHE349521:GHAL-1454-MONOMER.

    Family and domain databases

    Gene3Di 3.40.1030.10. 1 hit.
    3.90.1170.30. 1 hit.
    HAMAPi MF_00703. Thymid_phosp_2.
    InterProi IPR000312. Glycosyl_Trfase_fam3.
    IPR017459. Glycosyl_Trfase_fam3_N_dom.
    IPR013102. PYNP_C.
    IPR000053. Pyrmidine_PPase.
    IPR017872. Pyrmidine_PPase_CS.
    IPR028579. Thym_Pase_Put.
    IPR013466. Thymidine/AMP_Pase.
    [Graphical view ]
    PANTHERi PTHR10515. PTHR10515. 1 hit.
    Pfami PF02885. Glycos_trans_3N. 1 hit.
    PF00591. Glycos_transf_3. 1 hit.
    PF07831. PYNP_C. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000478. TP_PyNP. 1 hit.
    SMARTi SM00941. PYNP_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47648. SSF47648. 1 hit.
    SSF52418. SSF52418. 1 hit.
    SSF54680. SSF54680. 1 hit.
    TIGRFAMsi TIGR02645. ARCH_P_rylase. 1 hit.
    PROSITEi PS00647. THYMID_PHOSPHORYLASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KCTC 2396.

    Entry informationi

    Entry nameiTYPH_HAHCH
    AccessioniPrimary (citable) accession number: Q2SLV0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 15, 2008
    Last sequence update: January 24, 2006
    Last modified: October 1, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3