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Protein
Submitted name:

Putative type III secretion protein YscC

Gene

HCH_03240

Organism
Hahella chejuensis (strain KCTC 2396)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciHCHE349521:GHAL-3112-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative type III secretion protein YscCImported
Gene namesi
Ordered Locus Names:HCH_03240Imported
OrganismiHahella chejuensis (strain KCTC 2396)Imported
Taxonomic identifieri349521 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaOceanospirillalesHahellaceaeHahella
Proteomesi
  • UP000000238 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121Sequence analysisAdd
BLAST
Chaini22 – 573552Sequence analysisPRO_5004215725Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi349521.HCH_03240.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini179 – 311133Secretin_NInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiEOG6423BN.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2SH74-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRPLLSLIVL LMCLSSAAVR AEGWPWAKLS YAHYAENEPV QELLQQFAAA
60 70 80 90 100
INTPVVVSDK VQGVVNGRFE KAPARDFIDR LAKLHSLLWY YDGQVLYVYG
110 120 130 140 150
ASEVETDLIH LQDVSSQRLI KTLTNLGVLD RRYTLRAIPG EGIVMVSGPP
160 170 180 190 200
RYTQLVQEVA DILRSGQQDK PKTGDAFVVQ VFELKHAWAD DRSMVVGGQR
210 220 230 240 250
IAVPGVASSL QAILGRRISE PTVSAIAPKT LPKLKGQGLV QGRYGPTEIT
260 270 280 290 300
PSQETNREIV SVRSEEGGVN SETAGYIIAN ERLNAVIVHD RQSKMPLYQN
310 320 330 340 350
LIDTLDQPRS QVEIEVSIID VSTDRLNEMG FEWRINGRNG SFTNADFSQG
360 370 380 390 400
ALPRSPNELS FVVGDGANFS TLLTNTQDLF LSRIRALSED GDASVLSQPT
410 420 430 440 450
ILTLDNIEAV LDHSTTFFVR LVGDREVDLF PVSVGSVVRV TPHIVKGDLS
460 470 480 490 500
DKIHLNINIE DGQQTGQAVD DIPAVSKSII TTEALVNDNG SLLVGGYYFN
510 520 530 540 550
QDSTNRSKIP VLGDIPLLGR LFRTDGSQLQ KRARLFLISP RIVGSNTAEI
560 570
KYNRRLESLI NKYLSTAPEL FTP
Length:573
Mass (Da):63,115
Last modified:January 24, 2006 - v1
Checksum:iC1D5CDCFA5E321A8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000155 Genomic DNA. Translation: ABC30000.1.

Genome annotation databases

EnsemblBacteriaiABC30000; ABC30000; HCH_03240.
KEGGihch:HCH_03240.
PATRICi22087178. VBIHahChe29232_2962.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000155 Genomic DNA. Translation: ABC30000.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi349521.HCH_03240.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABC30000; ABC30000; HCH_03240.
KEGGihch:HCH_03240.
PATRICi22087178. VBIHahChe29232_2962.

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiEOG6423BN.

Enzyme and pathway databases

BioCyciHCHE349521:GHAL-3112-MONOMER.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KCTC 2396Imported.

Entry informationi

Entry nameiQ2SH74_HAHCH
AccessioniPrimary (citable) accession number: Q2SH74
Entry historyi
Integrated into UniProtKB/TrEMBL: January 24, 2006
Last sequence update: January 24, 2006
Last modified: March 16, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.