Q2SFX1 (RIMK2_HAHCH) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Ribosomal protein S6 modification protein 2

Gene names

Name:	rimK2
Ordered Locus Names:	HCH_03717

Organism

Hahella chejuensis (strain KCTC 2396) [Complete proteome] [HAMAP]

Taxonomic identifier

349521 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Oceanospirillales › Hahellaceae › Hahella

Protein attributes

Sequence length	304 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 By similarity. HAMAP MF_01552
Cofactor	Binds 2 magnesium or manganese ions per subunit By similarity.
Sequence similarities	Belongs to the rimK family. Contains 1 ATP-grasp domain.

Ontologies

Keywords
Biological process	Protein biosynthesis
Ligand	ATP-binding Magnesium Manganese Metal-binding Nucleotide-binding
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	protein modification process Inferred from electronic annotation. Source: InterPro translation Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ligase activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 304	304	Ribosomal protein S6 modification protein 2 HAMAP MF_01552		PRO_0000340542
Regions
	Domain	107 – 290	184	ATP-grasp
	Nucleotide binding	134 – 189	56	ATP By similarity
Sites
	Metal binding	251	1	Magnesium or manganese 1 By similarity
	Metal binding	263	1	Magnesium or manganese 1 By similarity
	Metal binding	263	1	Magnesium or manganese 2 By similarity
	Metal binding	265	1	Magnesium or manganese 2 By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q2SFX1 [UniParc]. Last modified January 24, 2006. Version 1. Checksum: 529D31CCADB032FD	FASTA	304	32,632
	10 20 30 40 50 60 MKIGILSRNS KLYSTSRLVE AARERGHEPR VVDVLKCYMN ITTNAPTVRY RSSGVSEELQ 70 80 90 100 110 120 FDAVIPRIGA SVTTYGCAVL RQFEVSGVYS INESIAITRS RDKLRAHQLL ARKGVGQPVT 130 140 150 160 170 180 SYAHSADATN DLIESVNGAP LIVKVMASTH GNGVVLAETD KAAETLINAF RGLKADFLVQ 190 200 210 220 230 240 EFIKEAGGSD IRCFVIGDKV VAAMQRTAQP GEFRSNLHRG GSAQVVKLRP NERRLAVQAA 250 260 270 280 290 300 QVMGLDLAGV DIIRSSHGPL VLEVNSSPGL KGIESATNKD IAGAIIDYIV KDVLNGPNKP KGKG

References

[1]

"Genomic blueprint of Hahella chejuensis, a marine microbe producing an algicidal agent." Jeong H., Yim J.H., Lee C., Choi S.-H., Park Y.K., Yoon S.H., Hur C.-G., Kang H.-Y., Kim D., Lee H.H., Park K.H., Park S.-H., Park H.-S., Lee H.K., Oh T.K., Kim J.F. Nucleic Acids Res. 33:7066-7073(2005) [PubMed: 16352867] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: KCTC 2396.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000155 Genomic DNA. Translation: ABC30453.1.
RefSeq	YP_434878.1. NC_007645.1.
3D structure databases
ProteinModelPortal	Q2SFX1.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2SFX1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3837453.
GenomeReviews	Gene locus HCH_03717 in contig CP000155_GR.
KEGG	hch:HCH_03717.
NMPDR	fig|349521.5.peg.3271.
PATRIC	22088014. VBIHahChe29232_3380.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0189.
HOGENOM	HBG679591.
OMA	YFALAVI.
PhylomeDB	Q2SFX1.
ProtClustDB	CLSK2527176.
Enzyme and pathway databases
BioCyc	HCHE349521:HCH_03717-MONOMER.
Family and domain databases
HAMAP	MF_01552. RimK. [Tree]
InterPro	IPR011761. ATP-grasp. IPR013651. ATP-grasp_RimK-type. IPR013815. ATP_grasp_subdomain_1. IPR013816. ATP_grasp_subdomain_2. IPR023533. Ribosomal_S6_modifier_RimK. IPR004666. RpS6_RimK/Lys_biosynth_LsyX. [Graphical view]
Gene3D	G3DSA:3.30.1490.20. ATP_grasp_subdomain_1. 1 hit. G3DSA:3.30.470.20. ATP_grasp_subdomain_2. 1 hit.
KO	K05844.
Pfam	PF08443. RimK. 1 hit. [Graphical view]
TIGRFAMs	TIGR00768. RimK_fam. 1 hit.
PROSITE	PS50975. ATP_GRASP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RIMK2_HAHCH

Accession

Primary (citable) accession number: Q2SFX1

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 10, 2008
Last sequence update:	January 24, 2006
Last modified:	January 25, 2012
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program