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Q2SER3 (Q2SER3_HAHCH) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:HCH_04152 EMBL ABC30861.1
OrganismHahella chejuensis (strain KCTC 2396) [Complete proteome] [HAMAP] EMBL ABC30861.1
Taxonomic identifier349521 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaOceanospirillalesHahellaceaeHahella

Protein attributes

Sequence length579 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Sequences

Sequence LengthMass (Da)Tools
Q2SER3 [UniParc].

Last modified January 24, 2006. Version 1.
Checksum: 646B775E97207164

FASTA57963,784
        10         20         30         40         50         60 
MVMDNVNNKN GDNRLGEGMK RFIFASVCAG ALCAAGNGYG EVNRHASVMV HLFEWSWEDI 

        70         80         90        100        110        120 
AQECEQYLGP KGFTAVQVSP PQAHIGGAQW WTRYQPVSYV LNSRSGDRER FQNMTQRCAA 

       130        140        150        160        170        180 
AGVDVYADLV INHMASTGFD FPDVPYGVND FHNWNCGGIN YGDANQVWNC DLVGLKDLKT 

       190        200        210        220        230        240 
ESDYVRGKIA DYINDLMRLG VKGFRIDAAK HMPPADIENI VGRVQGSPYI FQEVIRASGE 

       250        260        270        280        290        300 
AVQPEMYTHI ADVTEFQMER DLAWHFRNGR MANLIDFSQW DGRVASSDAM VFVANHDDQR 

       310        320        330        340        350        360 
QHPEWALTWN DPQGMYYLAH IFMLAYPYGY PRVMSSYYFN NHDQGPPNSG PHTAGACGVD 

       370        380        390        400        410        420 
WVCEHRWGGI GNMAKFRQAT AANAYISNVS RDGDNRLAFG RGGLGFVALN NDTGAWSASL 

       430        440        450        460        470        480 
DTGLPAGEYC DILHGDYVKG VCTGPTVFVD SAGYASVNVA GRDAMAMHVE ARVADCPQCQ 

       490        500        510        520        530        540 
SQRVDVSFTC DNGQTQWGQS VYAVGDLPEL GGWSPAGAVK LEPTAYPVWS GVISVPMGTQ 

       550        560        570 
IEWKCLKRDE NNPGAGIEWQ PGSNTVFNSD LINATRGGW 

« Hide

References

[1]"Genomic blueprint of Hahella chejuensis, a marine microbe producing an algicidal agent."
Jeong H., Yim J.H., Lee C., Choi S.H., Park Y.K., Yoon S.H., Hur C.G., Kang H.Y., Kim D., Lee H.H., Park K.H., Park S.H., Park H.S., Lee H.K., Oh T.K., Kim J.F.
Nucleic Acids Res. 33:7066-7073(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KCTC 2396 EMBL ABC30861.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000155 Genomic DNA. Translation: ABC30861.1.
RefSeqYP_435286.1. NC_007645.1.

3D structure databases

ProteinModelPortalQ2SER3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING349521.HCH_04152.

Protein family/group databases

CAZyCBM20. Carbohydrate-Binding Module Family 20.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3841602.
KEGGhch:HCH_04152.
PATRIC22088772. VBIHahChe29232_3759.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000253313.
KOK01176.
OMAQPISYKW.
OrthoDBEOG6RZB1B.

Enzyme and pathway databases

BioCycHCHE349521:GHAL-3973-MONOMER.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEPS51166. CBM20. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2SER3_HAHCH
AccessionPrimary (citable) accession number: Q2SER3
Entry history
Integrated into UniProtKB/TrEMBL: January 24, 2006
Last sequence update: January 24, 2006
Last modified: April 16, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)