SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q2SER3

- Q2SER3_HAHCH

UniProt

Q2SER3 - Q2SER3_HAHCH

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Alpha-amylase
Gene
HCH_04152
Organism
Hahella chejuensis (strain KCTC 2396)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. hydrolase activity, acting on glycosyl bonds Source: UniProtKB-KW
  3. starch binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciHCHE349521:GHAL-3973-MONOMER.

Protein family/group databases

CAZyiCBM20. Carbohydrate-Binding Module Family 20.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:HCH_04152Imported
OrganismiHahella chejuensis (strain KCTC 2396)Imported
Taxonomic identifieri349521 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaOceanospirillalesHahellaceaeHahella
ProteomesiUP000000238: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi349521.HCH_04152.

Structurei

3D structure databases

ProteinModelPortaliQ2SER3.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000253313.
KOiK01176.
OMAiVAINHES.
OrthoDBiEOG6RZB1B.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMiSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51166. CBM20. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2SER3-1 [UniParc]FASTAAdd to Basket

« Hide

MVMDNVNNKN GDNRLGEGMK RFIFASVCAG ALCAAGNGYG EVNRHASVMV    50
HLFEWSWEDI AQECEQYLGP KGFTAVQVSP PQAHIGGAQW WTRYQPVSYV 100
LNSRSGDRER FQNMTQRCAA AGVDVYADLV INHMASTGFD FPDVPYGVND 150
FHNWNCGGIN YGDANQVWNC DLVGLKDLKT ESDYVRGKIA DYINDLMRLG 200
VKGFRIDAAK HMPPADIENI VGRVQGSPYI FQEVIRASGE AVQPEMYTHI 250
ADVTEFQMER DLAWHFRNGR MANLIDFSQW DGRVASSDAM VFVANHDDQR 300
QHPEWALTWN DPQGMYYLAH IFMLAYPYGY PRVMSSYYFN NHDQGPPNSG 350
PHTAGACGVD WVCEHRWGGI GNMAKFRQAT AANAYISNVS RDGDNRLAFG 400
RGGLGFVALN NDTGAWSASL DTGLPAGEYC DILHGDYVKG VCTGPTVFVD 450
SAGYASVNVA GRDAMAMHVE ARVADCPQCQ SQRVDVSFTC DNGQTQWGQS 500
VYAVGDLPEL GGWSPAGAVK LEPTAYPVWS GVISVPMGTQ IEWKCLKRDE 550
NNPGAGIEWQ PGSNTVFNSD LINATRGGW 579
Length:579
Mass (Da):63,784
Last modified:January 24, 2006 - v1
Checksum:i646B775E97207164
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000155 Genomic DNA. Translation: ABC30861.1.
RefSeqiYP_435286.1. NC_007645.1.

Genome annotation databases

EnsemblBacteriaiABC30861; ABC30861; HCH_04152.
GeneIDi3841602.
KEGGihch:HCH_04152.
PATRICi22088772. VBIHahChe29232_3759.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000155 Genomic DNA. Translation: ABC30861.1 .
RefSeqi YP_435286.1. NC_007645.1.

3D structure databases

ProteinModelPortali Q2SER3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 349521.HCH_04152.

Protein family/group databases

CAZyi CBM20. Carbohydrate-Binding Module Family 20.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABC30861 ; ABC30861 ; HCH_04152 .
GeneIDi 3841602.
KEGGi hch:HCH_04152.
PATRICi 22088772. VBIHahChe29232_3759.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000253313.
KOi K01176.
OMAi VAINHES.
OrthoDBi EOG6RZB1B.

Enzyme and pathway databases

BioCyci HCHE349521:GHAL-3973-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view ]
SUPFAMi SSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEi PS51166. CBM20. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genomic blueprint of Hahella chejuensis, a marine microbe producing an algicidal agent."
    Jeong H., Yim J.H., Lee C., Choi S.H., Park Y.K., Yoon S.H., Hur C.G., Kang H.Y., Kim D., Lee H.H., Park K.H., Park S.H., Park H.S., Lee H.K., Oh T.K., Kim J.F.
    Nucleic Acids Res. 33:7066-7073(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KCTC 2396Imported.

Entry informationi

Entry nameiQ2SER3_HAHCH
AccessioniPrimary (citable) accession number: Q2SER3
Entry historyi
Integrated into UniProtKB/TrEMBL: January 24, 2006
Last sequence update: January 24, 2006
Last modified: July 9, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3