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Q2SER3

- Q2SER3_HAHCH

UniProt

Q2SER3 - Q2SER3_HAHCH

Protein

Alpha-amylase

Gene

HCH_04152

Organism
Hahella chejuensis (strain KCTC 2396)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 64 (01 Oct 2014)
      Sequence version 1 (24 Jan 2006)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro
    3. starch binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationImported, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciHCHE349521:GHAL-3973-MONOMER.

    Protein family/group databases

    CAZyiCBM20. Carbohydrate-Binding Module Family 20.
    GH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:HCH_04152Imported
    OrganismiHahella chejuensis (strain KCTC 2396)Imported
    Taxonomic identifieri349521 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaOceanospirillalesHahellaceaeHahella
    ProteomesiUP000000238: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi349521.HCH_04152.

    Structurei

    3D structure databases

    ProteinModelPortaliQ2SER3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000253313.
    KOiK01176.
    OMAiVAINHES.
    OrthoDBiEOG6RZB1B.

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR013784. Carb-bd-like_fold.
    IPR002044. CBM_fam20.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF00686. CBM_20. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    SM01065. CBM_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF49452. SSF49452. 1 hit.
    SSF51445. SSF51445. 1 hit.
    PROSITEiPS51166. CBM20. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q2SER3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVMDNVNNKN GDNRLGEGMK RFIFASVCAG ALCAAGNGYG EVNRHASVMV    50
    HLFEWSWEDI AQECEQYLGP KGFTAVQVSP PQAHIGGAQW WTRYQPVSYV 100
    LNSRSGDRER FQNMTQRCAA AGVDVYADLV INHMASTGFD FPDVPYGVND 150
    FHNWNCGGIN YGDANQVWNC DLVGLKDLKT ESDYVRGKIA DYINDLMRLG 200
    VKGFRIDAAK HMPPADIENI VGRVQGSPYI FQEVIRASGE AVQPEMYTHI 250
    ADVTEFQMER DLAWHFRNGR MANLIDFSQW DGRVASSDAM VFVANHDDQR 300
    QHPEWALTWN DPQGMYYLAH IFMLAYPYGY PRVMSSYYFN NHDQGPPNSG 350
    PHTAGACGVD WVCEHRWGGI GNMAKFRQAT AANAYISNVS RDGDNRLAFG 400
    RGGLGFVALN NDTGAWSASL DTGLPAGEYC DILHGDYVKG VCTGPTVFVD 450
    SAGYASVNVA GRDAMAMHVE ARVADCPQCQ SQRVDVSFTC DNGQTQWGQS 500
    VYAVGDLPEL GGWSPAGAVK LEPTAYPVWS GVISVPMGTQ IEWKCLKRDE 550
    NNPGAGIEWQ PGSNTVFNSD LINATRGGW 579
    Length:579
    Mass (Da):63,784
    Last modified:January 24, 2006 - v1
    Checksum:i646B775E97207164
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000155 Genomic DNA. Translation: ABC30861.1.
    RefSeqiYP_435286.1. NC_007645.1.

    Genome annotation databases

    EnsemblBacteriaiABC30861; ABC30861; HCH_04152.
    GeneIDi3841602.
    KEGGihch:HCH_04152.
    PATRICi22088772. VBIHahChe29232_3759.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000155 Genomic DNA. Translation: ABC30861.1 .
    RefSeqi YP_435286.1. NC_007645.1.

    3D structure databases

    ProteinModelPortali Q2SER3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 349521.HCH_04152.

    Protein family/group databases

    CAZyi CBM20. Carbohydrate-Binding Module Family 20.
    GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABC30861 ; ABC30861 ; HCH_04152 .
    GeneIDi 3841602.
    KEGGi hch:HCH_04152.
    PATRICi 22088772. VBIHahChe29232_3759.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000253313.
    KOi K01176.
    OMAi VAINHES.
    OrthoDBi EOG6RZB1B.

    Enzyme and pathway databases

    BioCyci HCHE349521:GHAL-3973-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR013784. Carb-bd-like_fold.
    IPR002044. CBM_fam20.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF00686. CBM_20. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    SM01065. CBM_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49452. SSF49452. 1 hit.
    SSF51445. SSF51445. 1 hit.
    PROSITEi PS51166. CBM20. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KCTC 2396Imported.

    Entry informationi

    Entry nameiQ2SER3_HAHCH
    AccessioniPrimary (citable) accession number: Q2SER3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 24, 2006
    Last sequence update: January 24, 2006
    Last modified: October 1, 2014
    This is version 64 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3