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Protein
Submitted name:

ABC-type sugar transport system, periplasmic component

Gene

HCH_06819

Organism
Hahella chejuensis (strain KCTC 2396)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Sugar transportImported, Transport

Names & Taxonomyi

Protein namesi
Submitted name:
ABC-type sugar transport system, periplasmic componentImported
Gene namesi
Ordered Locus Names:HCH_06819Imported
OrganismiHahella chejuensis (strain KCTC 2396)Imported
Taxonomic identifieri349521 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaOceanospirillalesHahellaceaeHahella
Proteomesi
  • UP000000238 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi349521.HCH_06819.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3KSMX-ray1.90A/B39-313[»]
ProteinModelPortaliQ2S7D2.
SMRiQ2S7D2.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ2S7D2.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini43 – 299Peripla_BP_4InterPro annotationAdd BLAST257

Phylogenomic databases

eggNOGiENOG4105E20. Bacteria.
COG1879. LUCA.
KOiK10439.
OMAiVYVSNVK.
OrthoDBiPOG091H0DIL.

Family and domain databases

InterProiIPR028082. Peripla_BP_I.
IPR025997. SBP_2_dom.
[Graphical view]
PfamiPF13407. Peripla_BP_4. 1 hit.
[Graphical view]
SUPFAMiSSF53822. SSF53822. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2S7D2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSVLHSPGA VRRLSVCAAL LALVWLIASP LSQADIHQPK LLLVLKGDSN
60 70 80 90 100
AYWRQVYLGA QKAADEAGVT LLHRSTKDDG DIAGQIQILS YHLSQAPPDA
110 120 130 140 150
LILAPNSAED LTPSVAQYRA RNIPVLVVDS DLAGDAHQGL VATDNYAAGQ
160 170 180 190 200
LAARALLATL DLSKERNIAL LRLRAGNAST DQREQGFLDV LRKHDKIRII
210 220 230 240 250
AAPYAGDDRG AARSEMLRLL KETPTIDGLF TPNESTTIGA LVAIRQSGMS
260 270 280 290 300
KQFGFIGFDQ TEELEAAMYA GEISNLVVQN PEYMGYLAVQ RALDLVRGKP
310
IPAFTDTGVR LLQPLPKP
Length:318
Mass (Da):34,301
Last modified:January 24, 2006 - v1
Checksum:i73098B80FB09ECA3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000155 Genomic DNA. Translation: ABC33442.1.

Genome annotation databases

EnsemblBacteriaiABC33442; ABC33442; HCH_06819.
KEGGihch:HCH_06819.
PATRICi22093762. VBIHahChe29232_6209.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000155 Genomic DNA. Translation: ABC33442.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3KSMX-ray1.90A/B39-313[»]
ProteinModelPortaliQ2S7D2.
SMRiQ2S7D2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi349521.HCH_06819.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABC33442; ABC33442; HCH_06819.
KEGGihch:HCH_06819.
PATRICi22093762. VBIHahChe29232_6209.

Phylogenomic databases

eggNOGiENOG4105E20. Bacteria.
COG1879. LUCA.
KOiK10439.
OMAiVYVSNVK.
OrthoDBiPOG091H0DIL.

Miscellaneous databases

EvolutionaryTraceiQ2S7D2.

Family and domain databases

InterProiIPR028082. Peripla_BP_I.
IPR025997. SBP_2_dom.
[Graphical view]
PfamiPF13407. Peripla_BP_4. 1 hit.
[Graphical view]
SUPFAMiSSF53822. SSF53822. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ2S7D2_HAHCH
AccessioniPrimary (citable) accession number: Q2S7D2
Entry historyi
Integrated into UniProtKB/TrEMBL: January 24, 2006
Last sequence update: January 24, 2006
Last modified: November 2, 2016
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.