Q2S5Y4 (Q2S5Y4_SALRD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Sensory box/ggdef family protein, putative EMBL ABC44382.1

Gene names

Ordered Locus Names:

SRU_0251

Organism

Salinibacter ruber (strain DSM 13855 / M31)

Taxonomic identifier

309807 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Bacteroidetes Order II. Incertae sedis › Rhodothermaceae › Salinibacter

Protein attributes

Sequence length	1118 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro intracellular signal transduction Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular function	phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro two-component sensor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2S5Y4 [UniParc]. Last modified January 24, 2006. Version 1. Checksum: 5D243402C99C71BF	FASTA	1,118	124,894
	10 20 30 40 50 60 MSHSAPVGEA RRLGALGRLN ILDTDSEVAF DQIAEVAQQV FGTQGAAVSL VAEERQWFKA 70 80 90 100 110 120 ACGISLDETP REQSFCTHVI EGDGVMVVQD VQADPRFRDN SLIEEEGIRF YAGAPLSVGD 130 140 150 160 170 180 QLHVGTLCLT DPAPRSFGEE DRALLTQLAS VATNLLEARL QAHENRYLTS ALEQVDEPVS 190 200 210 220 230 240 IIEGNPEKPS EARLAWANDA YAARGETTQS ALEGKTPWVF ENLERGSETE SRVCHALKVG 250 260 270 280 290 300 EPVRGKTPED EKDAARQTFT WVLAPVRNHE QITHWIVVQQ DTTEQQRVQQ AMRTQRDRLQ 310 320 330 340 350 360 RMQGVAQTGG WEYDPKSDSF TGSNEFYRLI GLPQSTNFDL ERAFQLYPPS VRGRVKTAAQ 370 380 390 400 410 420 RCLEDGSPFD MEVPLVSATG QHREVRVRGS AEREEGRTAR MTGTIQDITT RKQREQHLRQ 430 440 450 460 470 480 ANALFEHSQE GFLLFDLKQD EDEAEFVIQR VNPAYEQMSG RRADEVRGRS VRDIHGEEQG 490 500 510 520 530 540 AEIASHLRRC AGQGEPKDWE MKLKTNGSMT YWSVQAAPIY GEDGQVQQIT ATVRNVTERK 550 560 570 580 590 600 NREEKIRESR ERWRLLVESH RDPVQITVGK TIQYVNSSAV ELYGASDPEE IVGRSVLEFA 610 620 630 640 650 660 TNDGPGARSE MDKALQAHQE ELLREEPPSF EYEIKRLDGE RRVVEFYSVS IKYEGKQAAQ 670 680 690 700 710 720 TVLRDVTQQR REEARLRHRA THDQLTGLYR DSVFRERAQQ AIDASDEDKG ALLYVDLDQF 730 740 750 760 770 780 KSINDKNGHH VGDAVLMEAA NRICSVVRDV DPVGRMGGDE FAVWSSSVTD SETAKTMAQR 790 800 810 820 830 840 ITLVLDQPYA VEDRCLQVGA SVGFAVCDLE DQDIDGLIQD ADAAMYRAKS SPDRSLSHHG 850 860 870 880 890 900 PSAGSKKNTS LRAEVRRGID QNEFEPLFLP VVRLSDGNLV GFEVLARWRR EDGNLDPPDV 910 920 930 940 950 960 FLGVAEETGM ISPITQSVLE EACRKVESLQ QHRGPDLSVA LSGNFSRQEF FREETHEFVR 970 980 990 1000 1010 1020 HLLEEYDLAP SNLTMEVTER LLENENQTNT AVVDRLRSLG VNVEIDDFGT GYSSFHSLLQ 1030 1040 1050 1060 1070 1080 FPTDGLKLDK GLISETTASE DACVATRSVI EMAKSLGLRV TAEGIETTAQ LEVLRDLGCP 1090 1100 1110 LGQGFLFSRP VPAGDLPALI DSPPWADLWK DESASPVG

References

[1]

"The genome of Salinibacter ruber: convergence and gene exchange among hyperhalophilic bacteria and archaea." Mongodin E.F., Nelson K.E., Daugherty S., DeBoy R.T., Wister J., Khouri H., Weidman J., Walsh D.A., Papke R.T., Sanchez Perez G., Sharma A.K., Nesbo C.L., MacLeod D., Bapteste E., Doolittle W.F., Charlebois R.L., Legault B., Rodriguez-Valera F. Proc. Natl. Acad. Sci. U.S.A. 102:18147-18152(2005) [PubMed: 16330755] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13855 / M31.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000159 Genomic DNA. Translation: ABC44382.1.
RefSeq	YP_444397.1. NC_007677.1.
3D structure databases
ProteinModelPortal	Q2S5Y4.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2S5Y4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3851415.
GenomeReviews	Gene locus SRU_0251 in contig CP000159_GR.
KEGG	sru:SRU_0251.
NMPDR	fig|309807.5.peg.224.
PATRIC	23422813. VBISalRub86502_0258.
TIGR	SRU_0251.
Phylogenomic databases
eggNOG	COG5001.
OMA	SERWTRM.
PhylomeDB	Q2S5Y4.
Enzyme and pathway databases
BioCyc	SRUB309807:SRU_0251-MONOMER.
Family and domain databases
InterPro	IPR001054. A/G_cyclase. IPR000160. Diguanylate_cyclase-pred. IPR001633. Diguanylate_PEstase_EAL_dom. IPR003018. GAF. IPR001610. PAC. IPR000014. PAS. IPR000700. PAS-assoc_C. IPR013656. PAS_4. [Graphical view]
Gene3D	G3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit.
Pfam	PF00563. EAL. 1 hit. PF01590. GAF. 1 hit. PF00990. GGDEF. 1 hit. PF08448. PAS_4. 2 hits. [Graphical view]
SMART	SM00052. EAL. 1 hit. SM00065. GAF. 1 hit. SM00267. GGDEF. 1 hit. SM00086. PAC. 4 hits. SM00091. PAS. 2 hits. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit. SSF141868. SSF141868. 1 hit.
TIGRFAMs	TIGR00254. GGDEF. 1 hit. TIGR00229. Sensory_box. 2 hits.
PROSITE	PS50883. EAL. 1 hit. PS50887. GGDEF. 1 hit. PS50113. PAC. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q2S5Y4_SALRD

Accession

Primary (citable) accession number: Q2S5Y4

Entry history

Integrated into UniProtKB/TrEMBL:	January 24, 2006
Last sequence update:	January 24, 2006
Last modified:	December 14, 2011
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)