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Protein

UPF0301 protein SRU_0495

Gene

SRU_0495

Organism
Salinibacter ruber (strain DSM 13855 / M31)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciSRUB309807:GJJD-495-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0301 protein SRU_0495UniRule annotation
Gene namesi
Ordered Locus Names:SRU_0495
OrganismiSalinibacter ruber (strain DSM 13855 / M31)
Taxonomic identifieri309807 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidetes Order II. Incertae sedisRhodothermaceaeSalinibacter
Proteomesi
  • UP000008674 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 188188UPF0301 protein SRU_0495PRO_0000258878Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi309807.SRU_0495.

Structurei

3D structure databases

ProteinModelPortaliQ2S591.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0301 (AlgH) family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108UJU. Bacteria.
COG1678. LUCA.
HOGENOMiHOG000281194.
KOiK07735.
OMAiIYICAHS.
OrthoDBiEOG6RVFX5.

Family and domain databases

HAMAPiMF_00758. UPF0301.
InterProiIPR003774. UPF0301.
[Graphical view]
PfamiPF02622. DUF179. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2S591-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPDSDEVDLG PGTLLISAPM MQDPNFRRSV VLLCEHNDRE GTFGLILNRE
60 70 80 90 100
LDVSLGDVLD EYVTYDPPLY MGGPVQRETL HYLHTREDIP GGVALPGDMT
110 120 130 140 150
WGGDFEAVQQ LAKGGDAAPD NLRFFLGYAG WGPGQLEGEL GEEAWIPAPG
160 170 180
AAEFVFDTDP DQLWRAILRR MGGEYAVLAN FPDDPRMN
Length:188
Mass (Da):20,709
Last modified:January 24, 2006 - v1
Checksum:i3401672546D87FAA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000159 Genomic DNA. Translation: ABC44213.1.
RefSeqiWP_011403273.1. NC_007677.1.
YP_444640.1. NC_007677.1.

Genome annotation databases

EnsemblBacteriaiABC44213; ABC44213; SRU_0495.
GeneIDi3851499.
KEGGisru:SRU_0495.
PATRICi23423335. VBISalRub86502_0518.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000159 Genomic DNA. Translation: ABC44213.1.
RefSeqiWP_011403273.1. NC_007677.1.
YP_444640.1. NC_007677.1.

3D structure databases

ProteinModelPortaliQ2S591.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi309807.SRU_0495.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABC44213; ABC44213; SRU_0495.
GeneIDi3851499.
KEGGisru:SRU_0495.
PATRICi23423335. VBISalRub86502_0518.

Phylogenomic databases

eggNOGiENOG4108UJU. Bacteria.
COG1678. LUCA.
HOGENOMiHOG000281194.
KOiK07735.
OMAiIYICAHS.
OrthoDBiEOG6RVFX5.

Enzyme and pathway databases

BioCyciSRUB309807:GJJD-495-MONOMER.

Family and domain databases

HAMAPiMF_00758. UPF0301.
InterProiIPR003774. UPF0301.
[Graphical view]
PfamiPF02622. DUF179. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 13855 / M31.

Entry informationi

Entry nameiY495_SALRD
AccessioniPrimary (citable) accession number: Q2S591
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: January 24, 2006
Last modified: May 11, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.