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Q2S499 (Q2S499_SALRD) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length1152 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q2S499 [UniParc].

Last modified January 24, 2006. Version 1.
Checksum: EED8922FC2BBD8C0

FASTA1,152132,323
        10         20         30         40         50         60 
MAGGPFSRSA VNVPTFNVPT FQRSTRMPDD FLDDPLWYKD AVIYELHVRS FYDSNNDGYG 

        70         80         90        100        110        120 
DFQGLREKLP YLESLGVNTL WLLPFLESPL RDDGYDTADY FKVLPIHGDL DDFRAFLDDA 

       130        140        150        160        170        180 
HARGMRVITE LVLNHTSDQH PWFQEARDPD SDKHDWYVWS DTDERYDDVR VIFTDTEDSN 

       190        200        210        220        230        240 
WAWDPKAEKY YWHRFFSHQP DLNFDNPEVR EKMKEVMFFW LDMGVDGLRL DAVPYLFERE 

       250        260        270        280        290        300 
GTSSENLPET IAYVKELRAA VEERYGPGKV LLAEANQWPE DTLPYFGEDA EGESTGVQMA 

       310        320        330        340        350        360 
FNFPVMPRLY MALRRENRRP VVEMLDLTSG IPDDAQWALF LRNHDELTLE MVTDEERDYM 

       370        380        390        400        410        420 
YHEYGADDRF RINVGIRRRL TPLLGGERRR IELMNALLLS LKGSPIIYYG DEIGMGDDPF 

       430        440        450        460        470        480 
LGDRNGVRTP MQWSPDKNGG FSRAPHHKLF MPPINRGKYS YEFVNVEDAE ADPYSLLHFM 

       490        500        510        520        530        540 
RRLIALRQQH KNIFGRGSLE LLPVENQSIL AFLREYEGER ILVVNNLSRF TQSVHIPARE 

       550        560        570        580        590        600 
DLQGLAPVEL SGQSAFPPIE DDDYHLTVGP HHFYWFKLVP KEDVQRDDTR RSGLQPLEDK 

       610        620        630        640        650        660 
NGRTRPVLPV AEGLQNVLVP TMAQRRGPEQ IEALLPEFIN EQRWFGGKGE GIEGVEVEDA 

       670        680        690        700        710        720 
VRLQSDPVVY LSVLRVDLPE DTSFYTLPLM AAPEPEASDI LDEHPNATLA WLEVEDTEER 

       730        740        750        760        770        780 
RLVYDATVNP RFWATLFRWW QRGGTGRSLK GLYTAEPSEA MGDAPPDDVR LLTGEQSNTS 

       790        800        810        820        830        840 
AIVNNDYFLK LYRRLEEGPN PEKELLEHLT DIDFTFSPRL HGTLNFRRRH RQYTLGVLQE 

       850        860        870        880        890        900 
ALAVDADAWS YTLSCTTTFL DRVENSPFPH EQAKNTGPSA DGPQWTADRF SDATVPVWLE 

       910        920        930        940        950        960 
ELAPELISFA RTLGVRTAEM HHALAQAGGD EMRPVEAPTD AGAELGTRIR TEMEETRALL 

       970        980        990       1000       1010       1020 
DRQPDRVSGH VPSDPAWSAA RDRLAPLDDV PGTHDRIRIH GDYHLGQLLR AEGDIYVLDF 

      1030       1040       1050       1060       1070       1080 
EGEPTRPLDE RRRRKNALRD VAGMLRSLEY AVLASWQDHA DVDPDYEPWI DALLYWTETT 

      1090       1100       1110       1120       1130       1140 
FLDAYADTTG DAAFLPAAPA RYSFLWAFLL DKALYEVRYE LNHRPDWAWL PLHGLHRLLA 

      1150 
PRDATASDPL DA 

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References

[1]"The genome of Salinibacter ruber: convergence and gene exchange among hyperhalophilic bacteria and archaea."
Mongodin E.F., Nelson K.E., Daugherty S., Deboy R.T., Wister J., Khouri H., Weidman J., Walsh D.A., Papke R.T., Sanchez Perez G., Sharma A.K., Nesbo C.L., MacLeod D., Bapteste E., Doolittle W.F., Charlebois R.L., Legault B., Rodriguez-Valera F.
Proc. Natl. Acad. Sci. U.S.A. 102:18147-18152(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13855 / M31.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000159 Genomic DNA. Translation: ABC44183.1.
RefSeqYP_444982.1. NC_007677.1.

3D structure databases

ProteinModelPortalQ2S499.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING309807.SRU_0847.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABC44183; ABC44183; SRU_0847.
GeneID3852261.
KEGGsru:SRU_0847.
PATRIC23424051. VBISalRub86502_0873.

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000268420.
KOK05343.
OMARRGKHSP.
OrthoDBEOG6RVFV2.
PhylomeDBQ2S499.

Enzyme and pathway databases

BioCycSRUB309807:GJJD-845-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 1 hit.
TIGRFAMsTIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ2S499_SALRD
AccessionPrimary (citable) accession number: Q2S499
Entry history
Integrated into UniProtKB/TrEMBL: January 24, 2006
Last sequence update: January 24, 2006
Last modified: July 9, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)