Q2S3D3 (Q2S3D3_SALRD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family EMBL ABC45939.1

Gene names

Name:	rdgB EMBL ABC45939.1
Ordered Locus Names:	SRU_1172

Organism

Salinibacter ruber (strain DSM 13855 / M31)

Taxonomic identifier

309807 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Bacteroidetes Order II. Incertae sedis › Rhodothermaceae › Salinibacter

Protein attributes

Sequence length	203 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	A nucleoside triphosphate + H2O = a nucleotide + diphosphate. SAAS SAAS020922
Cofactor	Binds 1 divalent metal cation ion per subunit; can use either magnesium or manganese By similarity. SAAS SAAS020922
Subunit structure	Homodimer By similarity. SAAS SAAS020922
Sequence similarities	Belongs to the HAM1 NTPase family. RuleBase RU003781

Ontologies

Keywords
Biological process	Nucleotide metabolism SAAS SAAS020922
Ligand	Magnesium SAAS SAAS020922 Manganese SAAS SAAS020922 Metal-binding SAAS SAAS020922 Nucleotide-binding SAAS SAAS020922
Molecular function	Hydrolase SAAS SAAS020922 RuleBase RU003781
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	nucleotide metabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW nucleoside-triphosphatase activity Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2S3D3 [UniParc]. Last modified January 24, 2006. Version 1. Checksum: ADD9E3775AC040F1	FASTA	203	21,586
	10 20 30 40 50 60 MTTRSPLVLA TGNAGKVQEL RALLADLDLS LLPAGDLDDS LTVVEDADTL AGNAQKKARA 70 80 90 100 110 120 YHEHTGHAAL ADDTGLEVAA LDGGPGVHTA RFAGADATPE DNKQKLLRVL EEVDDRRARF 130 140 150 160 170 180 RTVVALIDAD GTAHTFEGRC AGTITTAPHG DGGFGYDPLF RPDGSDQTFA EMPTEDKNEI 190 200 SHRRKALDAL RTFLSGLKSD PGR

References

[1]

"The genome of Salinibacter ruber: convergence and gene exchange among hyperhalophilic bacteria and archaea." Mongodin E.F., Nelson K.E., Daugherty S., DeBoy R.T., Wister J., Khouri H., Weidman J., Walsh D.A., Papke R.T., Sanchez Perez G., Sharma A.K., Nesbo C.L., MacLeod D., Bapteste E., Doolittle W.F., Charlebois R.L., Legault B., Rodriguez-Valera F. Proc. Natl. Acad. Sci. U.S.A. 102:18147-18152(2005) [PubMed: 16330755] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13855 / M31.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000159 Genomic DNA. Translation: ABC45939.1.
RefSeq	YP_445298.1. NC_007677.1.
3D structure databases
ProteinModelPortal	Q2S3D3.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2S3D3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3852799.
GenomeReviews	Gene locus SRU_1172 in contig CP000159_GR.
KEGG	sru:SRU_1172.
NMPDR	fig|309807.5.peg.1092.
PATRIC	23424747. VBISalRub86502_1215.
TIGR	SRU_1172.
Phylogenomic databases
eggNOG	COG0127.
HOGENOM	HBG697237.
OMA	GVYTADW.
PhylomeDB	Q2S3D3.
ProtClustDB	CLSK2775084.
Enzyme and pathway databases
BioCyc	SRUB309807:SRU_1172-MONOMER.
Family and domain databases
HAMAP	MF_01405. Non_canon_purine_NTPase. [Tree]
InterPro	IPR002637. Ham1p-like. IPR020922. Nucleoside-triphosphatase. [Graphical view]
KO	K02428.
PANTHER	PTHR11067. Ham1p_like. 1 hit.
Pfam	PF01725. Ham1p_like. 1 hit. [Graphical view]
TIGRFAMs	TIGR00042. TIGR00042. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2S3D3_SALRD

Accession

Primary (citable) accession number: Q2S3D3

Entry history

Integrated into UniProtKB/TrEMBL:	January 24, 2006
Last sequence update:	January 24, 2006
Last modified:	December 14, 2011
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)