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Q2S1Q0 (Q2S1Q0_SALRD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Transcription antitermination protein nusG RuleBase RU000538
Gene names
Name:nusG EMBL ABC45062.1
Ordered Locus Names:SRU_1763
OrganismSalinibacter ruber (strain DSM 13855 / M31)
Taxonomic identifier309807 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Bacteroidetes Order II. Incertae sedis › Rhodothermaceae › Salinibacter

Protein attributes

Sequence length185 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase By similarity. SAAS SAAS006645 RuleBase RU000538

Sequence similarities

Belongs to the nusG family. RuleBase RU003559

Sequences

Sequence LengthMass (Da)Tools
Q2S1Q0 [UniParc].

Last modified January 24, 2006. Version 1.
Checksum: 1DC776C44DF74024

FASTA18521,301
        10         20         30         40         50         60 
MAEDTETDTW YVLRTFSNHE KKVRRYLESE IERIGLEDQV EEILIPTETV FEMKGGEKKT 

        70         80         90        100        110        120 
KEKTFFPGYI LLNCTLTSDL RDLAEDLPSV IGFLTTGTGD EPTQLREEEI KRILGKMDRA 

       130        140        150        160        170        180 
EEMGEQPEMP FKVGDPVKVV DGPFDSFNGI VEDVYPDQMK VKVMVSIFGR KTPVELDYLQ 


VEHEE

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References

[1]"The genome of Salinibacter ruber: convergence and gene exchange among hyperhalophilic bacteria and archaea."
Mongodin E.F., Nelson K.E., Daugherty S., DeBoy R.T., Wister J., Khouri H., Weidman J., Walsh D.A., Papke R.T., Sanchez Perez G., Sharma A.K., Nesbo C.L., MacLeod D., Bapteste E., Doolittle W.F., Charlebois R.L., Legault B., Rodriguez-Valera F.
Proc. Natl. Acad. Sci. U.S.A. 102:18147-18152(2005) [PubMed: 16330755] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13855 / M31.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000159 Genomic DNA. Translation: ABC45062.1.
RefSeqYP_445881.1. NC_007677.1.

3D structure databases

ProteinModelPortalQ2S1Q0.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ2S1Q0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3852228.
GenomeReviewsGene locus SRU_1763 in contig CP000159_GR.
KEGGsru:SRU_1763.
NMPDRfig|309807.5.peg.1669.
PATRIC23425993. VBISalRub86502_1830.
TIGRSRU_1763.

Phylogenomic databases

eggNOGCOG0250.
HOGENOMHBG751162.
OMAVASGCEK.
PhylomeDBQ2S1Q0.
ProtClustDBCLSK2774484.

Enzyme and pathway databases

BioCycSRUB309807:SRU_1763-MONOMER.

Family and domain databases

InterProIPR005824. KOW.
IPR001062. Transcrpt_antiterm_NusG.
IPR015869. Transcrpt_antiterm_NusG_bac_CS.
IPR006645. Transcrpt_antiterm_NusG_N.
IPR014722. Transl_SH3-like_sub.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
Gene3DG3DSA:2.30.30.30. Ribosomal_L2. 1 hit.
G3DSA:3.30.70.940. Transcrpt_antiterm_NusG_N. 1 hit.
KOK02601.
PfamPF02357. NusG. 1 hit.
[Graphical view]
PRINTSPR00338. NUSGTNSCPFCT.
SMARTSM00739. KOW. 1 hit.
SM00738. NGN. 1 hit.
[Graphical view]
SUPFAMSSF82679. Transcrpt_antiterm_NusG_N. 1 hit.
SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMsTIGR00922. NusG. 1 hit.
PROSITEPS01014. NUSG. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2S1Q0_SALRD
AccessionPrimary (citable) accession number: Q2S1Q0
Entry history
Integrated into UniProtKB/TrEMBL: January 24, 2006
Last sequence update: January 24, 2006
Last modified: December 14, 2011
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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