Q2RYZ6 (Q2RYZ6_SALRD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycosyl hydrolase, family 13 EMBL ABC43953.1

Gene names

Ordered Locus Names:

SRU_2743

Organism

Salinibacter ruber (strain DSM 13855 / M31)

Taxonomic identifier

309807 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Bacteroidetes Order II. Incertae sedis › Rhodothermaceae › Salinibacter

Protein attributes

Sequence length	480 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABC43953.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2RYZ6 [UniParc]. Last modified January 24, 2006. Version 1. Checksum: 772FA4BC27864133	FASTA	480	53,489
	10 20 30 40 50 60 MTTPDWAKHA VFYQIFPDRF ARSGAVEAQE AVQLTPWGTP PAEQGFQGGD LYGIVDRLDY 70 80 90 100 110 120 LDALGVTALY LNPIFASAAN HRYHTYDYYE VDPLLGGTDA LRALLDAAHA RDMRVVLDGV 130 140 150 160 170 180 FNHASRGFWP FHHVLENGPD SPYVDWFKIE DWPLRPYASD QPHNYAAWYD IPALPELNTD 190 200 210 220 230 240 HPPVQDFLLD VARHWIAFGI DGWRLDVPRE IETDGFWEAF RTVVKDANPE AYLVGEIWDE 250 260 270 280 290 300 APAWLQGDRF DGLMNYPLLD ATLGFFGAGS LRDYSKAHLT FDPIDAPAFA DELDRLLALY 310 320 330 340 350 360 EWEATCAQLN LLDSHDMARA QWILNNNPAA FRQAVLFLMT MPGAPCIYYG DEIGLSAAGD 370 380 390 400 410 420 PHCREAFPRD DADWDTDLLS FYQAATALRH RHEVLRTGRI EVLHASGRTL VLRRTLADAT 430 440 450 460 470 480 ALVAFNAGAD AVQVALEAAA LPTKPLSSAW PPSANAPLSA SSSPLPLSLP PRATRVWTTD

References

[1]

"The genome of Salinibacter ruber: convergence and gene exchange among hyperhalophilic bacteria and archaea." Mongodin E.F., Nelson K.E., Daugherty S., DeBoy R.T., Wister J., Khouri H., Weidman J., Walsh D.A., Papke R.T., Sanchez Perez G., Sharma A.K., Nesbo C.L., MacLeod D., Bapteste E., Doolittle W.F., Charlebois R.L., Legault B., Rodriguez-Valera F. Proc. Natl. Acad. Sci. U.S.A. 102:18147-18152(2005) [PubMed: 16330755] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13855 / M31.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000159 Genomic DNA. Translation: ABC43953.1.
RefSeq	YP_446835.1. NC_007677.1.
3D structure databases
ProteinModelPortal	Q2RYZ6.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2RYZ6.
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3850732.
GenomeReviews	Gene locus SRU_2743 in contig CP000159_GR.
KEGG	sru:SRU_2743.
NMPDR	fig|309807.5.peg.2592.
PATRIC	23428087. VBISalRub86502_2856.
TIGR	SRU_2743.
Phylogenomic databases
eggNOG	COG0366.
HOGENOM	HBG726713.
OMA	ETVWYQI.
PhylomeDB	Q2RYZ6.
ProtClustDB	CLSK2773744.
Enzyme and pathway databases
BioCyc	SRUB309807:SRU_2743-MONOMER.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01234.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2RYZ6_SALRD

Accession

Primary (citable) accession number: Q2RYZ6

Entry history

Integrated into UniProtKB/TrEMBL:	January 24, 2006
Last sequence update:	January 24, 2006
Last modified:	December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)