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Protein

tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG

Gene

mnmG

Organism
Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm5s2U34.UniRule annotation

Cofactori

FADUniRule annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi11 – 16FADUniRule annotation6
Nucleotide bindingi271 – 285NADUniRule annotationAdd BLAST15

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

tRNA processing

Keywords - Ligandi

FAD, Flavoprotein, NAD

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGUniRule annotation
Alternative name(s):
Glucose-inhibited division protein AUniRule annotation
Gene namesi
Name:mnmGUniRule annotation
Synonyms:gidAUniRule annotation
Ordered Locus Names:Rru_A3625
OrganismiRhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1)
Taxonomic identifieri269796 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeRhodospirillum
Proteomesi
  • UP000001929 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000166611 – 629tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGAdd BLAST629

Interactioni

Subunit structurei

Homodimer. Heterotetramer of two MnmE and two MnmG subunits.UniRule annotation

Protein-protein interaction databases

STRINGi269796.Rru_A3625.

Structurei

3D structure databases

ProteinModelPortaliQ2RN76.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MnmG family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107RE5. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201059.
KOiK03495.
OMAiFRPGYAI.
OrthoDBiPOG091H01O0.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA. 1 hit.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2RN76-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNHWDVIVV GGGHAGTEAA AAAARLGAKT LLATHKLETV GTMSCNPAIG
60 70 80 90 100
GLAKGHLVRE IDALDGVMGR AIDRGGIQFR ILNRSKGPAV RGPRAQADRA
110 120 130 140 150
LYAQAVRAIL ADQPGLTLAA LAIEDLLIGN DGRCAGVIDA EGGVHRAGAV
160 170 180 190 200
VLTTGTFLRG VIHIGTQTTP AGRIGEAPAL GLSATLARLG FPLGRLKTGT
210 220 230 240 250
PPRLDGRTIA WATLESQPGD EPPPPFSFLT TAITTPQISC AITETTAETH
260 270 280 290 300
RVIRENLHRA PLYSGQIQGV GPRYCPSIED KVVRFADRDR HQIFLEPEGL
310 320 330 340 350
DDPTVYPNGI STSLPIDVQL ALLATIPGLE KAEMMRPGYA IEYDFVDPRC
360 370 380 390 400
LGPTLETDRL PGLFLAGQIN GTTGYEEAAA QGLIAGLNAA RVAGAGERAA
410 420 430 440 450
PITFDRAEGY LGVLVDDLIT LGTTEPYRMF TSRAEYRLLL RADNADLRLT
460 470 480 490 500
AKGIALGCVG AARTAAFEDK RAALTAARTM IDGLALTPPD LARRGIAVNQ
510 520 530 540 550
DGQRRTPLDL LCHADIDWAR LVALWPELGA IRPDVAEQLE IGARYAGYLE
560 570 580 590 600
RMHGDVAAFR RDEALVLPAD LAYDGLANLS AELRGKLTLA RPATLGAAAR
610 620
IPGMTPAALT ALLRHVKRRE RDSVEECFT
Length:629
Mass (Da):66,792
Last modified:January 24, 2006 - v1
Checksum:i01AF6BAE43589160
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000230 Genomic DNA. Translation: ABC24419.1.
RefSeqiWP_011391372.1. NC_007643.1.
YP_428706.1. NC_007643.1.

Genome annotation databases

EnsemblBacteriaiABC24419; ABC24419; Rru_A3625.
GeneIDi3837081.
KEGGirru:Rru_A3625.
PATRICi23331058. VBIRhoRub82919_3746.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000230 Genomic DNA. Translation: ABC24419.1.
RefSeqiWP_011391372.1. NC_007643.1.
YP_428706.1. NC_007643.1.

3D structure databases

ProteinModelPortaliQ2RN76.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi269796.Rru_A3625.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABC24419; ABC24419; Rru_A3625.
GeneIDi3837081.
KEGGirru:Rru_A3625.
PATRICi23331058. VBIRhoRub82919_3746.

Phylogenomic databases

eggNOGiENOG4107RE5. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201059.
KOiK03495.
OMAiFRPGYAI.
OrthoDBiPOG091H01O0.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA. 1 hit.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiMNMG_RHORT
AccessioniPrimary (citable) accession number: Q2RN76
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: January 24, 2006
Last modified: November 2, 2016
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.