Q2RMP9 (RS20_RHORT) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S20

Gene names

Name:	rpsT
Ordered Locus Names:	Rru_A3802

Organism

Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)

Taxonomic identifier

269796 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodospirillales › Rhodospirillaceae › Rhodospirillum

Protein attributes

Sequence length	88 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds directly to 16S ribosomal RNA By similarity. HAMAP MF_00500
Sequence similarities	Belongs to the ribosomal protein S20P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 88	88	30S ribosomal protein S20 HAMAP MF_00500		PRO_0000236449

Sequences

	Sequence		Length	Mass (Da)
	Q2RMP9 [UniParc]. Last modified January 24, 2006. Version 1. Checksum: DE2EFA6FFA692C51	FASTA	88	9,574
	10 20 30 40 50 60 MANHKSAKKR ILRNASRSEI NHARIGRIRT FVKKVEAAIA SGDKDAAKAA FQIAMPEVQR 70 80 GVTKGVLHQN TASRKISRLS ARIKAIGA

References

[1]

"Complete sequence of the chromosome of Rhodospirillum rubrum ATCC 11170." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. , Kyrpides N., Mavrommatis K., Richardson P., Zhang Y., Roberts G., Reslewic S., Zhou S., Schwartz D.C. Submitted (DEC-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 11170 / NCIB 8255.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000230 Genomic DNA. Translation: ABC24596.1.
RefSeq	YP_428883.1. NC_007643.1.
3D structure databases
ProteinModelPortal	Q2RMP9.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2RMP9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3837259.
GenomeReviews	Gene locus Rru_A3802 in contig CP000230_GR.
KEGG	rru:Rru_A3802.
NMPDR	fig|1085.1.peg.1114.
PATRIC	23331416. VBIRhoRub82919_3924.
Phylogenomic databases
eggNOG	COG0268.
HOGENOM	HBG734145.
OMA	RTQMRGA.
ProtClustDB	CLSK2773287.
Enzyme and pathway databases
BioCyc	RRUB269796:RRU_A3802-MONOMER.
Family and domain databases
HAMAP	MF_00500. Ribosomal_S20. [Tree]
InterPro	IPR002583. Ribosomal_S20. [Graphical view]
Gene3D	G3DSA:1.20.58.110. Ribosomal_S20. 1 hit.
KO	K02968.
Pfam	PF01649. Ribosomal_S20p. 1 hit. [Graphical view]
ProDom	PD004231. Ribosomal_S20. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF46992. Ribosomal_S20p. 1 hit.
TIGRFAMs	TIGR00029. S20. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RS20_RHORT

Accession

Primary (citable) accession number: Q2RMP9

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 30, 2006
Last sequence update:	January 24, 2006
Last modified:	January 25, 2012
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program