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Q2QYE1

- APY3_ORYSJ

UniProt

Q2QYE1 - APY3_ORYSJ

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Protein

Probable apyrase 3

Gene

APY3

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Catalyzes the hydrolysis of phosphoanhydride bonds of nucleoside tri- and di-phosphates.By similarity

Catalytic activityi

A nucleoside 5'-triphosphate + 2 H2O = a nucleoside 5'-phosphate + 2 phosphate.

Cofactori

Calcium.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei169 – 1691Proton acceptorBy similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi47 – 5711ATP-bindingCuratedAdd
BLAST
Nucleotide bindingi193 – 20311ATP-bindingCuratedAdd
BLAST

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. hydrolase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Ligandi

ATP-binding, Calcium, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable apyrase 3 (EC:3.6.1.5)
Short name:
OsAPY3
Alternative name(s):
ATP-diphosphatase
ATP-diphosphohydrolase
Adenosine diphosphatase
Short name:
ADPase
Gene namesi
Name:APY3
Ordered Locus Names:Os12g0123500, LOC_Os12g02980
ORF Names:OsJ_35056
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 12

Organism-specific databases

GrameneiQ2QYE1.

Subcellular locationi

Secreted Curated

GO - Cellular componenti

  1. extracellular region Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222Sequence AnalysisAdd
BLAST
Chaini23 – 451429Probable apyrase 3PRO_0000419909Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi275 – 2751N-linked (GlcNAc...)Sequence Analysis
Glycosylationi315 – 3151N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Glycoprotein

Expressioni

Gene expression databases

ExpressionAtlasiQ2QYE1. baseline.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os12g02980.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the GDA1/CD39 NTPase family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

InParanoidiQ2QYE1.
KOiK14641.
OMAiNVEASWA.

Family and domain databases

InterProiIPR000407. GDA1_CD39_NTPase.
[Graphical view]
PANTHERiPTHR11782. PTHR11782. 1 hit.
PfamiPF01150. GDA1_CD39. 1 hit.
[Graphical view]
PROSITEiPS01238. GDA1_CD39_NTPASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q2QYE1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAADHLVVAM LLLLALSPPA VADDTAVLGR KGGVVEGQAA GPGRYAVILD
60 70 80 90 100
AGSTGTRVHV FRFDNKLDLL KVGDNIELFA KVDPGLSSYA GRPQDAANSI
110 120 130 140 150
LPLLDKANTV VPARLMNKTP LKLGATAGLR LIGDEKANQI LEAVRDVVHT
160 170 180 190 200
KSKYQYNPNW INVLEGSQEG SYIWVALNYL LDKLGGDYSK TVGVVDLGGG
210 220 230 240 250
SVQMAYAISS NTAATAPKVP EGKDPYVVKE YLKGKDYNIY VHSYLHYGGF
260 270 280 290 300
ASRAHILERK DGPFSNCMLR GFSGNFTYNG KQYDATAAPQ GADYHKCREE
310 320 330 340 350
VVKLLKVNAP CETKNCSFNG VWNGGGGAGQ DDLYVASAFY YIASHVGFIN
360 370 380 390 400
SDAPSAKSTP ATFKAVAEKV CKLSVKEAKV EYPNVRDHAY LCMDLIYEYS
410 420 430 440 450
LLVDGFGLHP SKEITLVDKV KHGEYYIDAA WPLGTAIEAV SPKKRLREIY

K
Length:451
Mass (Da):48,901
Last modified:July 11, 2006 - v2
Checksum:iA4DCE9410897E241
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti225 – 2251P → S in AK072692. (PubMed:12869764)Curated

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DP000011 Genomic DNA. Translation: ABA95698.2.
AP008218 Genomic DNA. Translation: BAF29051.1.
CM000149 Genomic DNA. Translation: EEE52674.1.
AK072692 mRNA. No translation available.
RefSeqiNP_001066032.1. NM_001072564.1.
UniGeneiOs.11718.

Genome annotation databases

EnsemblPlantsiOS12T0123500-01; OS12T0123500-01; OS12G0123500.
GeneIDi4351367.
KEGGiosa:4351367.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DP000011 Genomic DNA. Translation: ABA95698.2 .
AP008218 Genomic DNA. Translation: BAF29051.1 .
CM000149 Genomic DNA. Translation: EEE52674.1 .
AK072692 mRNA. No translation available.
RefSeqi NP_001066032.1. NM_001072564.1.
UniGenei Os.11718.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 39947.LOC_Os12g02980.1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS12T0123500-01 ; OS12T0123500-01 ; OS12G0123500 .
GeneIDi 4351367.
KEGGi osa:4351367.

Organism-specific databases

Gramenei Q2QYE1.

Phylogenomic databases

InParanoidi Q2QYE1.
KOi K14641.
OMAi NVEASWA.

Gene expression databases

ExpressionAtlasi Q2QYE1. baseline.

Family and domain databases

InterProi IPR000407. GDA1_CD39_NTPase.
[Graphical view ]
PANTHERi PTHR11782. PTHR11782. 1 hit.
Pfami PF01150. GDA1_CD39. 1 hit.
[Graphical view ]
PROSITEi PS01238. GDA1_CD39_NTPASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications."
    The rice chromosomes 11 and 12 sequencing consortia
    BMC Biol. 3:20-20(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  5. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiAPY3_ORYSJ
AccessioniPrimary (citable) accession number: Q2QYE1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2012
Last sequence update: July 11, 2006
Last modified: October 29, 2014
This is version 60 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3