Q2QXP0 (Q2QXP0_ORYSJ) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 49.
History...
Names and origin
| Protein names | Submitted name: Glycosyltransferase 3, putative, expressed EMBL ABA95806.1 Submitted name: Os12g0149300 protein EMBL BAF29179.1 Submitted name: cDNA clone:002-172-B07, full insert sequence EMBL BAG99053.1 | ||||
| Gene names |
| ||||
| Organism | Oryza sativa subsp. japonica (Rice) EMBL ABA95806.1 | ||||
| Taxonomic identifier | 39947 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza |
Protein attributes
| Sequence length | 463 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Transferase EMBL ABA95806.1 |
| Gene Ontology (GO) | |
| Cellular component | integral to membrane Inferred from electronic annotation. Source: InterPro |
| Molecular function | transferase activity, transferring hexosyl groups Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| [1] | "The genomes of Oryza sativa: a history of duplications." Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. Yang H.PLoS Biol. 3:266-281(2005) [PubMed: 15685292] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
| [2] | "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice." Kikuchi S., Satoh K., Nagata T., Kawagashira N., Doi K., Kishimoto N., Yazaki J., Ishikawa M., Yamada H., Ooka H., Hotta I., Kojima K., Namiki T., Ohneda E., Yahagi W., Suzuki K., Li C., Ohtsuki K. Hayashizaki Y.Science 301:376-379(2003) Cited for: NUCLEOTIDE SEQUENCE. |
| [3] | "The map-based sequence of the rice genome." International Rice Genome Sequencing Project Matsumoto T., Wu J., Kanamori H., Katayose Y., Fujisawa M., Namiki N., Mizuno H., Yamamoto K., Antonio B.A., Baba T., Sakata K., Nagamura Y., Aoki H., Arikawa K., Arita K., Bito T., Chiden Y., Fujitsuka N. Sasaki T.Nature 436:793-800(2005) Cited for: NUCLEOTIDE SEQUENCE. |
| [4] | "Curated Genome Annotation of Oryza sativa ssp. japonica and Comparative Genome Analysis with Arabidopsis thaliana." The Rice Annotation Project (RAP) Itoh T., Tanaka T., Barrero R.A., Yamasaki C., Fujii Y., Hilton P.B., Antonio B.A., Aono H., Apweiler R., Bruskiewich R., Bureau T., Burr F., Costa de Oliveira A., Fuks G., Habara T., Haberer G., Han B., Harada E. Sasaki T.Genome Res. 17:175-183(2007) Cited for: NUCLEOTIDE SEQUENCE. |
| [5] | "The Rice Annotation Project Database (RAP-DB): 2008 update." The Rice Annotation Project (RAP) Tanaka T., Antonio B.A., Kikuchi S., Matsumoto T., Nagamura Y., Numa H., Sakai H., Wu J., Itoh T., Sasaki T., Aono R., Fujii Y., Habara T., Harada E., Kanno M., Kawahara Y., Kawashima H., Kubooka H. Echeverria M.Nucleic Acids Res. 36:D1028-D1033(2008) Cited for: NUCLEOTIDE SEQUENCE. |
| [6] | "The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information." Ohyanagi H., Tanaka T., Sakai H., Shigemoto Y., Yamaguchi K., Habara T., Fujii Y., Antonio B.A., Nagamura Y., Imanishi T., Ikeo K., Itoh T., Gojobori T., Sasaki T. Nucleic Acids Res. 34:D741-D744(2006) [PubMed: 16381971] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
| [7] | "The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications." The rice chromosomes 11 and 12 sequencing consortia BMC Biol. 3:20-20(2005) [PubMed: 16188032] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
| [8] | "Improved gene annotation of the rice (Oryza sativa) genomes." Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., Li J., Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., Samudrala R., Kristiansen K., Wong G.K.-S. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [9] | Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., Li J., Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., Samudrala R., Kristiansen K., Wong G.K.-S. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [10] | "The Second Rice Annotation Project Meeting (RAP2)." The Rice Annotation Project (RAP) Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [11] | Buell C.R., Wing R.A., McCombie W.A., Ouyang S. Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [12] | Buell R. Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [13] | "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 12." IRGSP(International Rice Genome Sequencing Project) Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | DP000011 Genomic DNA. Translation: ABA95806.1. AP008218 Genomic DNA. Translation: BAF29179.1. AK110842 mRNA. Translation: BAG99053.1. CM000149 Genomic DNA. Translation: EAZ19653.1. |
| RefSeq | NP_001066160.1. NM_001072692.1. |
| UniGene | Os.57061. |
3D structure databases | |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | GT34. Glycosyltransferase Family 34. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblPlants | LOC_Os12g05380.1; LOC_Os12g05380.1; LOC_Os12g05380. |
| GeneID | 4351508. |
| KEGG | osa:4351508. |
Organism-specific databases | |
| Gramene | Q2QXP0. |
Phylogenomic databases | |
| GeneTree | EPGT00070000028691. |
| HOGENOM | HBG319799. |
| OMA | RSWIALN. |
| PhylomeDB | Q2QXP0. |
| ProtClustDB | PLN03182. |
Family and domain databases | |
| InterPro | IPR008630. Glyco_trans_34. [Graphical view] |
| Pfam | PF05637. Glyco_transf_34. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q2QXP0_ORYSJ | ||||||||
| Accession | Primary (citable) accession number: Q2QXP0 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
