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Protein
Submitted name:

60S ribosomal protein L26-1, putative, expressed

Gene

Os12g0150100

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinImported

Enzyme and pathway databases

ReactomeiR-OSA-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-OSA-1799339 SRP-dependent cotranslational protein targeting to membrane
R-OSA-72689 Formation of a pool of free 40S subunits
R-OSA-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-OSA-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-OSA-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Submitted name:
60S ribosomal protein L26-1, putative, expressedImported
Submitted name:
Os12g0150100 proteinImported
Submitted name:
cDNA clone:001-045-F01, full insert sequenceImported
Gene namesi
Name:Os12g0150100Imported
Ordered Locus Names:LOC_Os12g05430Imported, Os12g0150100Imported
ORF Names:OsJ_35234Imported, OSNPB_120150100Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 12

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

ExpressionAtlasiQ2QXN5 differential

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os12g05430.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini48 – 75KOWInterPro annotationAdd BLAST28

Phylogenomic databases

eggNOGiKOG3401 Eukaryota
COG0198 LUCA
KOiK02898
OMAiVRIMRGD
OrthoDBiEOG09360SM0

Family and domain databases

Gene3Di2.30.30.30, 1 hit
HAMAPiMF_01326_A Ribosomal_L24_A, 1 hit
InterProiView protein in InterPro
IPR005824 KOW
IPR014722 Rib_L2_dom2
IPR005825 Ribosomal_L24/26_CS
IPR005756 Ribosomal_L26/L24P_euk/arc
IPR008991 Translation_prot_SH3-like_sf
PANTHERiPTHR11143 PTHR11143, 1 hit
PfamiView protein in Pfam
PF00467 KOW, 1 hit
PF16906 Ribosomal_L26, 1 hit
SMARTiView protein in SMART
SM00739 KOW, 1 hit
SUPFAMiSSF50104 SSF50104, 1 hit
TIGRFAMsiTIGR01080 rplX_A_E, 1 hit
PROSITEiView protein in PROSITE
PS01108 RIBOSOMAL_L24, 1 hit

Sequencei

Sequence statusi: Complete.

Q2QXN5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRNPRVTSS RRKCRKAHFT APSSVRRVLM SAALSTELRH KYNVRSIPIR
60 70 80 90 100
KDDEVQVVRG SYKGREGKVV QVYRRRWVIH VERITREKVN GSTVNVGIHP
110 120 130 140 150
SKVVVTKLKL DKDRKAILDR KASGRAADKA KGKFTAEDVA AAGASLQEID
Length:150
Mass (Da):16,931
Last modified:January 24, 2006 - v1
Checksum:i54F6E96AF9B5F8C4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DP000011 Genomic DNA Translation: ABA95811.1
AP008218 Genomic DNA Translation: BAF29184.1
AK105075 mRNA Translation: BAG97089.1
AP014968 Genomic DNA Translation: BAT15909.1
CM000149 Genomic DNA Translation: EAZ19657.1
RefSeqiXP_015618223.1, XM_015762737.1
UniGeneiOs.9317

Genome annotation databases

EnsemblPlantsiOs12t0150100-01; Os12t0150100-01; Os12g0150100
GeneIDi4351513
GrameneiOs12t0150100-01; Os12t0150100-01; Os12g0150100
KEGGiosa:4351513

Similar proteinsi

Entry informationi

Entry nameiQ2QXN5_ORYSJ
AccessioniPrimary (citable) accession number: Q2QXN5
Entry historyiIntegrated into UniProtKB/TrEMBL: January 24, 2006
Last sequence update: January 24, 2006
Last modified: May 23, 2018
This is version 116 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health