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Protein

Ribulose bisphosphate carboxylase small chain

Gene

Os12g0292400

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.UniRule annotation

Catalytic activityi

2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O.UniRule annotationSAAS annotation
3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyaseUniRule annotationSAAS annotation, MonooxygenaseUniRule annotationSAAS annotation, Oxidoreductase
Biological processCarbon dioxide fixationUniRule annotationSAAS annotation, PhotorespirationUniRule annotationSAAS annotation, PhotosynthesisUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Ribulose bisphosphate carboxylase small chainUniRule annotation (EC:4.1.1.39UniRule annotation)
Gene namesi
Name:Os12g0292400Imported
Ordered Locus Names:LOC_Os12g19470Imported, Os12g0292400Imported
ORF Names:OsJ_35820Imported, OSNPB_120292400Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 12

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

ChloroplastSAAS annotation, Plastid

Interactioni

Subunit structurei

8 large chains + 8 small chains.UniRule annotationSAAS annotation

Protein-protein interaction databases

STRINGi39947.LOC_Os12g19470.2.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini58 – 166RuBisCO_smallInterPro annotationAdd BLAST109

Sequence similaritiesi

Belongs to the RuBisCO small chain family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410IM2H. Eukaryota.
COG4451. LUCA.
KOiK01602.
OMAiYREHGNS.
OrthoDBiEOG09360OM1.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiView protein in InterPro
IPR024681. RuBisCO_sc.
IPR000894. RuBisCO_sc_dom.
IPR024680. RuBisCO_ssu_N.
PfamiView protein in Pfam
PF12338. RbcS. 1 hit.
PF00101. RuBisCO_small. 1 hit.
PRINTSiPR00152. RUBISCOSMALL.
SMARTiView protein in SMART
SM00961. RuBisCO_small. 1 hit.
SUPFAMiSSF55239. SSF55239. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2QTJ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPSVMASSA TSVAPFQGLK STAGLPVNRR SSSSSFGNVS NGGRIRCMQV
60 70 80 90 100
WPIEGIKKFE TLSYLPPLTV EDLLKQIEYL LRSKWVPCLE FSKVGFVYRE
110 120 130 140 150
NHRSPGYYDG RYWTMWKLPM FGCTDATQVL KELEEAKKAY PDAFVRIIGF
160 170
DNVRQVQLIS FIAYKPPGCE ESGGN
Length:175
Mass (Da):19,661
Last modified:January 24, 2006 - v1
Checksum:i5BA6D54E8216A2B1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DP000011 Genomic DNA. Translation: ABA97179.1.
DP000011 Genomic DNA. Translation: ABA97180.1.
AP008218 Genomic DNA. Translation: BAF29626.1.
AK068266 mRNA. Translation: BAG90832.1.
AK070257 mRNA. Translation: BAG91855.1.
AP014968 Genomic DNA. Translation: BAT16793.1.
CM000149 Genomic DNA. Translation: EAZ20216.1.
RefSeqiXP_015620270.1. XM_015764784.1.
UniGeneiOs.20927.
Os.96122.

Genome annotation databases

EnsemblPlantsiOS12T0292400-01; OS12T0292400-01; OS12G0292400.
GeneIDi4352021.
GrameneiOS12T0292400-01; OS12T0292400-01; OS12G0292400.
KEGGiosa:4352021.

Similar proteinsi

Entry informationi

Entry nameiQ2QTJ1_ORYSJ
AccessioniPrimary (citable) accession number: Q2QTJ1
Entry historyiIntegrated into UniProtKB/TrEMBL: January 24, 2006
Last sequence update: January 24, 2006
Last modified: August 30, 2017
This is version 101 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported