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Q2QSL4 (CDKF2_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative cyclin-dependent kinase F-2

Short name=CDKF;2
EC=2.7.11.22
EC=2.7.11.23
Gene names
Name:CDKF-2
Ordered Locus Names:Os12g0424700, LOC_Os12g23700
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length327 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + a protein = ADP + a phosphoprotein.

ATP + [DNA-directed RNA polymerase] = ADP + [DNA-directed RNA polymerase] phosphate.

Sequence similarities

Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.

Contains 1 protein kinase domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 327327Putative cyclin-dependent kinase F-2
PRO_0000296107

Regions

Domain4 – 295292Protein kinase
Nucleotide binding10 – 189ATP By similarity

Sites

Active site1341Proton acceptor By similarity
Binding site331ATP By similarity

Amino acid modifications

Modified residue1671Phosphothreonine By similarity

Sequences

Sequence LengthMass (Da)Tools
Q2QSL4 [UniParc].

Last modified January 24, 2006. Version 1.
Checksum: 0E78BEED04266316

FASTA32735,622
        10         20         30         40         50         60 
MERYECLGKI GEGAAGVVHV ARDRTTGETV AVKRLHGGIG CGEEEWLREA RCLQACRGHP 

        70         80         90        100        110        120 
HLVELRAAHR EMRRGGGGAC CYVVMEYVDG PSLSRVVREE RRGRPFPEAE ARRLMRQLLD 

       130        140        150        160        170        180 
GVAAMHAAGV MHRDLKPDNV VVGPRGDLKI CDFGMSRVTA AGAPPYTSPV VTLWYRAPEL 

       190        200        210        220        230        240 
ILGSQEYDSL VDTWSLGCIM AELLAGAPLF PGRSEMDQLN RVFDTVGMQD MKSWPGFARL 

       250        260        270        280        290        300 
PRAESALCSR ARPPSRLREM FPKLSAAGFD VLSGLLACRP DRRLTAADAL RCAWFTEADT 

       310        320 
PPDATPVTCG SARFTPCVSG VADAIVV 

« Hide

References

« Hide 'large scale' references
[1]"The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications."
The rice chromosomes 11 and 12 sequencing consortia
BMC Biol. 3:20-20(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[4]"Genome-wide identification and expression analysis of rice cell cycle genes."
Guo J., Song J., Wang F., Zhang X.S.
Plant Mol. Biol. 64:349-360(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DP000011 Genomic DNA. Translation: ABA97935.1.
AP008218 Genomic DNA. Translation: BAF29682.1.
RefSeqNP_001066663.1. NM_001073195.1.
UniGeneOs.86184.

3D structure databases

ProteinModelPortalQ2QSL4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsOS12T0424700-00; OS12T0424700-00; OS12G0424700.
GeneID4352099.
KEGGosa:4352099.

Organism-specific databases

GrameneQ2QSL4.

Phylogenomic databases

eggNOGCOG0515.
HOGENOMHOG000233024.
KOK08818.
OMAGRSEMDQ.
ProtClustDBCLSN2698852.

Family and domain databases

InterProIPR011009. Kinase-like_dom.
IPR000719. Prot_kinase_dom.
IPR002290. Ser/Thr_dual-sp_kinase_dom.
IPR008271. Ser/Thr_kinase_AS.
[Graphical view]
PfamPF00069. Pkinase. 1 hit.
[Graphical view]
SMARTSM00220. S_TKc. 1 hit.
[Graphical view]
SUPFAMSSF56112. SSF56112. 1 hit.
PROSITEPS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameCDKF2_ORYSJ
AccessionPrimary (citable) accession number: Q2QSL4
Entry history
Integrated into UniProtKB/Swiss-Prot: July 24, 2007
Last sequence update: January 24, 2006
Last modified: April 16, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations