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Protein
Submitted name:

60S ribosomal protein L2

Gene

Os12g0567700

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinImported

Enzyme and pathway databases

ReactomeiR-OSA-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-OSA-1799339 SRP-dependent cotranslational protein targeting to membrane
R-OSA-72689 Formation of a pool of free 40S subunits
R-OSA-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-OSA-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-OSA-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Submitted name:
60S ribosomal protein L2Imported
Submitted name:
60S ribosomal protein L2, putative, expressedImported
Submitted name:
Os12g0567700 proteinImported
Gene namesi
Name:Os12g0567700Imported
Ordered Locus Names:LOC_Os12g38000Imported, Os12g0567700Imported
ORF Names:OsJ_36548Imported, OSNPB_120567700Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 12

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

ExpressionAtlasiQ2QNF3 differential

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os12g38000.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini96 – 231Ribosomal_L2_CInterPro annotationAdd BLAST136

Phylogenomic databases

eggNOGiKOG2309 Eukaryota
COG0090 LUCA
KOiK02938
OMAiHGYIKGV
OrthoDBiEOG09360JBQ

Family and domain databases

Gene3Di2.30.30.30, 1 hit
4.10.950.10, 1 hit
HAMAPiMF_01320_A Ribosomal_L2_A, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR022666 Rbsml_prot_L2_RNA-bd_dom
IPR014722 Rib_L2_dom2
IPR002171 Ribosomal_L2
IPR023672 Ribosomal_L2_arc
IPR022669 Ribosomal_L2_C
IPR022671 Ribosomal_L2_CS
IPR014726 Ribosomal_L2_dom3
IPR008991 Translation_prot_SH3-like_sf
PANTHERiPTHR13691 PTHR13691, 1 hit
PfamiView protein in Pfam
PF00181 Ribosomal_L2, 1 hit
PF03947 Ribosomal_L2_C, 1 hit
PIRSFiPIRSF002158 Ribosomal_L2, 1 hit
SMARTiView protein in SMART
SM01383 Ribosomal_L2, 1 hit
SM01382 Ribosomal_L2_C, 1 hit
SUPFAMiSSF50104 SSF50104, 1 hit
SSF50249 SSF50249, 1 hit
PROSITEiView protein in PROSITE
PS00467 RIBOSOMAL_L2, 1 hit

Sequencei

Sequence statusi: Complete.

Q2QNF3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRVIRAQRK GAGSVFKSHT HHRKGPARFR SLDFGERNGY LKGVVTDIIH
60 70 80 90 100
DPGRGAPLAK VTFRHPFRYK HQKELFVAAE GMYTGQFVYC GRRATLSIGN
110 120 130 140 150
VLPIRSVPEG AVVCNVEHHV GDRGVFARAS GDYAIVISHN PDNGTSRIKL
160 170 180 190 200
PSGAKKIVPS SCRAMIGQVA GGGRTEKPML KAGNAYHKYR VKRNCWPKVR
210 220 230 240 250
GVAMNPVEHP HGGGNHQHIG HASTVRRDAP PGQKVGLIAA RRTGRLRGQA
260
AATAAKADKA T
Length:261
Mass (Da):28,249
Last modified:January 24, 2006 - v1
Checksum:iA065F1E097960AA8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DP000011 Genomic DNA Translation: ABA99598.1
KR905694 mRNA Translation: ALC78402.1
AP008218 Genomic DNA Translation: BAF30081.1
AP014968 Genomic DNA Translation: BAT17708.1
CM000149 Genomic DNA Translation: EAZ20909.1
RefSeqiXP_015619844.1, XM_015764358.1
UniGeneiOs.11297

Genome annotation databases

EnsemblPlantsiOs12t0567700-01; Os12t0567700-01; Os12g0567700
GeneIDi4352560
GrameneiOs12t0567700-01; Os12t0567700-01; Os12g0567700
KEGGiosa:4352560

Similar proteinsi

Entry informationi

Entry nameiQ2QNF3_ORYSJ
AccessioniPrimary (citable) accession number: Q2QNF3
Entry historyiIntegrated into UniProtKB/TrEMBL: January 24, 2006
Last sequence update: January 24, 2006
Last modified: May 23, 2018
This is version 121 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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