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Protein
Submitted name:

60S ribosomal protein L2

Gene

Os12g0567700

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinImported

Enzyme and pathway databases

ReactomeiR-OSA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-OSA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-OSA-72689. Formation of a pool of free 40S subunits.
R-OSA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-OSA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-OSA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Submitted name:
60S ribosomal protein L2Imported
Submitted name:
60S ribosomal protein L2, putative, expressedImported
Submitted name:
Os12g0567700 proteinImported
Gene namesi
Name:Os12g0567700Imported
Ordered Locus Names:LOC_Os12g38000Imported, Os12g0567700Imported
ORF Names:OsJ_36548Imported, OSNPB_120567700Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 12

Subcellular locationi

GO - Cellular componenti

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os12g38000.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini96 – 231Ribosomal_L2_CInterPro annotationAdd BLAST136

Phylogenomic databases

eggNOGiKOG2309. Eukaryota.
COG0090. LUCA.
KOiK02938.
OMAiHGYIKGV.
OrthoDBiEOG09360JBQ.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
4.10.950.10. 1 hit.
HAMAPiMF_01320_A. Ribosomal_L2_A. 1 hit.
InterProiView protein in InterPro
IPR012340. NA-bd_OB-fold.
IPR022666. Rbsml_prot_L2_RNA-bd_dom.
IPR014722. Rib_L2_dom2.
IPR002171. Ribosomal_L2.
IPR023672. Ribosomal_L2_arc.
IPR022669. Ribosomal_L2_C.
IPR022671. Ribosomal_L2_CS.
IPR014726. Ribosomal_L2_dom3.
IPR008991. Translation_prot_SH3-like.
PANTHERiPTHR13691. PTHR13691. 1 hit.
PfamiView protein in Pfam
PF00181. Ribosomal_L2. 1 hit.
PF03947. Ribosomal_L2_C. 1 hit.
PIRSFiPIRSF002158. Ribosomal_L2. 1 hit.
SMARTiView protein in SMART
SM01383. Ribosomal_L2. 1 hit.
SM01382. Ribosomal_L2_C. 1 hit.
SUPFAMiSSF50104. SSF50104. 1 hit.
SSF50249. SSF50249. 1 hit.
PROSITEiView protein in PROSITE
PS00467. RIBOSOMAL_L2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2QNF3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRVIRAQRK GAGSVFKSHT HHRKGPARFR SLDFGERNGY LKGVVTDIIH
60 70 80 90 100
DPGRGAPLAK VTFRHPFRYK HQKELFVAAE GMYTGQFVYC GRRATLSIGN
110 120 130 140 150
VLPIRSVPEG AVVCNVEHHV GDRGVFARAS GDYAIVISHN PDNGTSRIKL
160 170 180 190 200
PSGAKKIVPS SCRAMIGQVA GGGRTEKPML KAGNAYHKYR VKRNCWPKVR
210 220 230 240 250
GVAMNPVEHP HGGGNHQHIG HASTVRRDAP PGQKVGLIAA RRTGRLRGQA
260
AATAAKADKA T
Length:261
Mass (Da):28,249
Last modified:January 24, 2006 - v1
Checksum:iA065F1E097960AA8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DP000011 Genomic DNA. Translation: ABA99598.1.
KR905694 mRNA. Translation: ALC78402.1.
AP008218 Genomic DNA. Translation: BAF30081.1.
AP014968 Genomic DNA. Translation: BAT17708.1.
CM000149 Genomic DNA. Translation: EAZ20909.1.
RefSeqiXP_015619844.1. XM_015764358.1.
UniGeneiOs.11297.

Genome annotation databases

EnsemblPlantsiOS12T0567700-01; OS12T0567700-01; OS12G0567700.
GeneIDi4352560.
GrameneiOS12T0567700-01; OS12T0567700-01; OS12G0567700.
KEGGiosa:4352560.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ2QNF3_ORYSJ
AccessioniPrimary (citable) accession number: Q2QNF3
Entry historyiIntegrated into UniProtKB/TrEMBL: January 24, 2006
Last sequence update: January 24, 2006
Last modified: July 5, 2017
This is version 116 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported