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Q2QNE8

- MT4B_ORYSJ

UniProt

Q2QNE8 - MT4B_ORYSJ

Protein

Metallothionein-like protein 4B

Gene

MT4B

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
  1. Functioni

    Metallothioneins have a high content of cysteine residues that bind various heavy metals.

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW

    Keywords - Ligandi

    Metal-binding, Metal-thiolate cluster

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Metallothionein-like protein 4B
    Alternative name(s):
    Class I metallothionein-like protein 4B
    OsMT-I-4b
    Gene namesi
    Name:MT4B
    Ordered Locus Names:Os12g0568200, LOC_Os12g38051, LOC_Os12g38064
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 12

    Organism-specific databases

    GrameneiQ2QNE8.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 7979Metallothionein-like protein 4BPRO_0000263060Add
    BLAST

    Expressioni

    Tissue specificityi

    Expressed in roots.1 Publication

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    HOGENOMiHOG000220916.
    OMAiCENTALH.

    Family and domain databases

    InterProiIPR000347. Metalthion_15p.
    [Graphical view]
    PfamiPF01439. Metallothio_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q2QNE8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSCGGSCNCG SCGCGGGCGK MYPDLAEKIT TTTTTATTVL GVAPEKGHFE   50
    VMVGKAAESG EAAHGCSCGS SCKCNPCNC 79
    Length:79
    Mass (Da):7,720
    Last modified:January 24, 2006 - v1
    Checksum:iD75C94B7C41CD380
    GO

    Sequence cautioni

    The sequence BAF30084.2 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BE039194 mRNA. No translation available.
    DP000011 Genomic DNA. Translation: ABA99636.1.
    AP008218 Genomic DNA. Translation: BAF30084.2. Sequence problems.
    AK243301 mRNA. No translation available.
    RefSeqiNP_001067065.2. NM_001073597.2.
    UniGeneiOs.57928.

    Genome annotation databases

    EnsemblPlantsiOS12T0568200-01; OS12T0568200-01; OS12G0568200.
    GeneIDi4352563.
    KEGGiosa:4352563.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BE039194 mRNA. No translation available.
    DP000011 Genomic DNA. Translation: ABA99636.1 .
    AP008218 Genomic DNA. Translation: BAF30084.2 . Sequence problems.
    AK243301 mRNA. No translation available.
    RefSeqi NP_001067065.2. NM_001073597.2.
    UniGenei Os.57928.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS12T0568200-01 ; OS12T0568200-01 ; OS12G0568200 .
    GeneIDi 4352563.
    KEGGi osa:4352563.

    Organism-specific databases

    Gramenei Q2QNE8.

    Phylogenomic databases

    HOGENOMi HOG000220916.
    OMAi CENTALH.

    Family and domain databases

    InterProi IPR000347. Metalthion_15p.
    [Graphical view ]
    Pfami PF01439. Metallothio_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Functional genomics of plant stress tolerance."
      Bohnert H.J., Borchert C., Brazille S., Brooks J., Eaton M., Ferrea H., Kawasaki S., McCollough A., Michalowski C.B., Palacio C., Scara G., Wheeler M., Zepeda G.R.
      Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: cv. Nipponbare.
      Tissue: Root.
    2. "The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications."
      The rice chromosomes 11 and 12 sequencing consortia
      BMC Biol. 3:20-20(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    4. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    5. "Oryza sativa-full-length cDNA."
      The rice full-length cDNA consortium
      Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.
    6. "Molecular analyses of the metallothionein gene family in rice (Oryza sativa L.)."
      Zhou G., Xu Y., Li J., Yang L., Liu J.-Y.
      J. Biochem. Mol. Biol. 39:595-606(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, TISSUE SPECIFICITY.

    Entry informationi

    Entry nameiMT4B_ORYSJ
    AccessioniPrimary (citable) accession number: Q2QNE8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 12, 2006
    Last sequence update: January 24, 2006
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Metallothioneins
      Classification of metallothioneins and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3