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Q2QNE8

- MT4B_ORYSJ

UniProt

Q2QNE8 - MT4B_ORYSJ

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Protein

Metallothionein-like protein 4B

Gene

MT4B

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

Metallothioneins have a high content of cysteine residues that bind various heavy metals.

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

Metal-binding, Metal-thiolate cluster

Names & Taxonomyi

Protein namesi
Recommended name:
Metallothionein-like protein 4B
Alternative name(s):
Class I metallothionein-like protein 4B
OsMT-I-4b
Gene namesi
Name:MT4B
Ordered Locus Names:Os12g0568200, LOC_Os12g38051, LOC_Os12g38064
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 12

Organism-specific databases

GrameneiQ2QNE8.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7979Metallothionein-like protein 4BPRO_0000263060Add
BLAST

Expressioni

Tissue specificityi

Expressed in roots.1 Publication

Gene expression databases

ExpressionAtlasiQ2QNE8. baseline.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000220916.
InParanoidiQ2QNE8.
OMAiCENTALH.

Family and domain databases

InterProiIPR000347. Metalthion_15p.
[Graphical view]
PfamiPF01439. Metallothio_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2QNE8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSCGGSCNCG SCGCGGGCGK MYPDLAEKIT TTTTTATTVL GVAPEKGHFE
60 70
VMVGKAAESG EAAHGCSCGS SCKCNPCNC
Length:79
Mass (Da):7,720
Last modified:January 24, 2006 - v1
Checksum:iD75C94B7C41CD380
GO

Sequence cautioni

The sequence BAF30084.2 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BE039194 mRNA. No translation available.
DP000011 Genomic DNA. Translation: ABA99636.1.
AP008218 Genomic DNA. Translation: BAF30084.2. Sequence problems.
AK243301 mRNA. No translation available.
RefSeqiNP_001067065.2. NM_001073597.2.
UniGeneiOs.57928.

Genome annotation databases

EnsemblPlantsiOS12T0568200-01; OS12T0568200-01; OS12G0568200.
GeneIDi4352563.
KEGGiosa:4352563.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BE039194 mRNA. No translation available.
DP000011 Genomic DNA. Translation: ABA99636.1 .
AP008218 Genomic DNA. Translation: BAF30084.2 . Sequence problems.
AK243301 mRNA. No translation available.
RefSeqi NP_001067065.2. NM_001073597.2.
UniGenei Os.57928.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS12T0568200-01 ; OS12T0568200-01 ; OS12G0568200 .
GeneIDi 4352563.
KEGGi osa:4352563.

Organism-specific databases

Gramenei Q2QNE8.

Phylogenomic databases

HOGENOMi HOG000220916.
InParanoidi Q2QNE8.
OMAi CENTALH.

Gene expression databases

ExpressionAtlasi Q2QNE8. baseline.

Family and domain databases

InterProi IPR000347. Metalthion_15p.
[Graphical view ]
Pfami PF01439. Metallothio_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Functional genomics of plant stress tolerance."
    Bohnert H.J., Borchert C., Brazille S., Brooks J., Eaton M., Ferrea H., Kawasaki S., McCollough A., Michalowski C.B., Palacio C., Scara G., Wheeler M., Zepeda G.R.
    Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. Nipponbare.
    Tissue: Root.
  2. "The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications."
    The rice chromosomes 11 and 12 sequencing consortia
    BMC Biol. 3:20-20(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  4. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  5. "Oryza sativa-full-length cDNA."
    The rice full-length cDNA consortium
    Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  6. "Molecular analyses of the metallothionein gene family in rice (Oryza sativa L.)."
    Zhou G., Xu Y., Li J., Yang L., Liu J.-Y.
    J. Biochem. Mol. Biol. 39:595-606(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, TISSUE SPECIFICITY.

Entry informationi

Entry nameiMT4B_ORYSJ
AccessioniPrimary (citable) accession number: Q2QNE8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: January 24, 2006
Last modified: October 29, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Metallothioneins
    Classification of metallothioneins and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3