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Protein

Metallothionein-like protein 4C

Gene

MT4C

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Metallothioneins have a high content of cysteine residues that bind various heavy metals.

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Metal-binding, Metal-thiolate cluster

Names & Taxonomyi

Protein namesi
Recommended name:
Metallothionein-like protein 4C
Alternative name(s):
Class I metallothionein-like protein 4C
OsMT-I-4c
OsMT1c
Gene namesi
Name:MT4C
Ordered Locus Names:Os12g0571100, LOC_Os12g38300
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
ProteomesiUP000000763 Componenti: Chromosome 12

Organism-specific databases

GrameneiQ2QNC3.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7878Metallothionein-like protein 4CPRO_0000263061Add
BLAST

Expressioni

Tissue specificityi

Expressed in leaves, rachis, inflorescences and seeds.1 Publication

Gene expression databases

ExpressionAtlasiQ2QNC3. baseline.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

InParanoidiQ2QNC3.

Family and domain databases

InterProiIPR000347. Metalthion_15p.
[Graphical view]
PfamiPF01439. Metallothio_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2QNC3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSCGGSCNCG SCGCGGGCGK MYPDLAEKIT TTTTTATTVL GVAPEKGHSE
60 70
GVGKAAESGE AAHGCSCGSS CRCNPCNC
Length:78
Mass (Da):7,514
Last modified:January 24, 2006 - v1
Checksum:i0AF2B6CBEBC51E13
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BE039221 mRNA. No translation available.
DP000011 Genomic DNA. Translation: ABA99661.1.
AP008218 Genomic DNA. Translation: BAF30102.1.
RefSeqiNP_001067083.1. NM_001073615.1.
UniGeneiOs.37783.

Genome annotation databases

EnsemblPlantsiOS12T0571100-01; OS12T0571100-01; OS12G0571100.
GeneIDi4352582.
KEGGiosa:4352582.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BE039221 mRNA. No translation available.
DP000011 Genomic DNA. Translation: ABA99661.1.
AP008218 Genomic DNA. Translation: BAF30102.1.
RefSeqiNP_001067083.1. NM_001073615.1.
UniGeneiOs.37783.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS12T0571100-01; OS12T0571100-01; OS12G0571100.
GeneIDi4352582.
KEGGiosa:4352582.

Organism-specific databases

GrameneiQ2QNC3.

Phylogenomic databases

InParanoidiQ2QNC3.

Gene expression databases

ExpressionAtlasiQ2QNC3. baseline.

Family and domain databases

InterProiIPR000347. Metalthion_15p.
[Graphical view]
PfamiPF01439. Metallothio_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Functional genomics of plant stress tolerance."
    Bohnert H.J., Borchert C., Brazille S., Brooks J., Eaton M., Ferrea H., Kawasaki S., McCollough A., Michalowski C.B., Palacio C., Scara G., Wheeler M., Zepeda G.R.
    Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. Nipponbare.
    Tissue: Root.
  2. "The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications."
    The rice chromosomes 11 and 12 sequencing consortia
    BMC Biol. 3:20-20(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  4. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  5. "Molecular analyses of the metallothionein gene family in rice (Oryza sativa L.)."
    Zhou G., Xu Y., Li J., Yang L., Liu J.-Y.
    J. Biochem. Mol. Biol. 39:595-606(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, TISSUE SPECIFICITY.

Entry informationi

Entry nameiMT4C_ORYSJ
AccessioniPrimary (citable) accession number: Q2QNC3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: January 24, 2006
Last modified: July 22, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Metallothioneins
    Classification of metallothioneins and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.