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Protein

Probable protein phosphatase 2C 78

Gene

Os12g0580900

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Mg2+By similarity, Mn2+By similarityNote: Binds 2 magnesium or manganese ions per subunit.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi73 – 731Manganese 1By similarity
Metal bindingi73 – 731Manganese 2By similarity
Metal bindingi74 – 741Manganese 1; via carbonyl oxygenBy similarity
Metal bindingi274 – 2741Manganese 2By similarity
Metal bindingi333 – 3331Manganese 2By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protein phosphatase

Keywords - Ligandi

Magnesium, Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein phosphatase 2C 78 (EC:3.1.3.16)
Short name:
OsPP2C78
Gene namesi
Ordered Locus Names:Os12g0580900, LOC_Os12g39120
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
ProteomesiUP000000763 Componenti: Chromosome 12

Organism-specific databases

GrameneiQ2QN36.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 392392Probable protein phosphatase 2C 78PRO_0000363325Add
BLAST

Expressioni

Gene expression databases

ExpressionAtlasiQ2QN36. baseline.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os12g39120.1.

Structurei

3D structure databases

ProteinModelPortaliQ2QN36.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini39 – 342304PPM-type phosphatasePROSITE-ProRule annotationAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi15 – 2814Poly-GlyAdd
BLAST

Sequence similaritiesi

Belongs to the PP2C family.Curated
Contains 1 PPM-type phosphatase domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiCOG0631.
HOGENOMiHOG000238703.
InParanoidiQ2QN36.
OMAiEPSIKEH.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR015655. PP2C.
IPR000222. PP2C_BS.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
PROSITEiPS01032. PPM_1. 1 hit.
PS51746. PPM_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2QN36-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLRWLARPA ERCLGRGGGG GGGGGGDGLL WHAELKPHAS GEYSIAVAQA
60 70 80 90 100
NAELEDQGQV VTSPAATFVG VYDGHGGPEA SRFISSRLFP HLHRFASEQG
110 120 130 140 150
GMSTDAIKRA FHATEEEFLH MVKRSWLKQP QIASVGSCCL VGAITDNVLY
160 170 180 190 200
VANLGDSRAV LGRRGPDGRE VVAERLSNDH NVAEEEVRKE LTEQHPDDSR
210 220 230 240 250
IVIYTRGVWR IKGIIQVSRS IGDVYLKKPE FARDPIFRQY VCSIPLKRPV
260 270 280 290 300
MTAEPSIKEH QLRQQDLFLI FASDGLWEQL TDKAAVDIVF KNPRAGIAKR
310 320 330 340 350
LVRAALTEAA RKREMRYTDI KHIERGSRRN FHDDITVVVV YLDHHKHGVR
360 370 380 390
PNLGNRNSFR FTNAPVDIFS GSSEEVDHHP LRLNLAMDGA VG
Length:392
Mass (Da):43,529
Last modified:January 24, 2006 - v1
Checksum:i6625DD5DE8495B8F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DP000011 Genomic DNA. Translation: ABA99127.1.
AP008218 Genomic DNA. Translation: BAF30152.1.
AK071206 mRNA. Translation: BAG92373.1.
RefSeqiNP_001067133.1. NM_001073665.1.
UniGeneiOs.22969.

Genome annotation databases

EnsemblPlantsiOS12T0580900-01; OS12T0580900-01; OS12G0580900.
GeneIDi4352638.
KEGGiosa:4352638.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DP000011 Genomic DNA. Translation: ABA99127.1.
AP008218 Genomic DNA. Translation: BAF30152.1.
AK071206 mRNA. Translation: BAG92373.1.
RefSeqiNP_001067133.1. NM_001073665.1.
UniGeneiOs.22969.

3D structure databases

ProteinModelPortaliQ2QN36.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os12g39120.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS12T0580900-01; OS12T0580900-01; OS12G0580900.
GeneIDi4352638.
KEGGiosa:4352638.

Organism-specific databases

GrameneiQ2QN36.

Phylogenomic databases

eggNOGiCOG0631.
HOGENOMiHOG000238703.
InParanoidiQ2QN36.
OMAiEPSIKEH.

Gene expression databases

ExpressionAtlasiQ2QN36. baseline.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR015655. PP2C.
IPR000222. PP2C_BS.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
PROSITEiPS01032. PPM_1. 1 hit.
PS51746. PPM_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications."
    The rice chromosomes 11 and 12 sequencing consortia
    BMC Biol. 3:20-20(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  5. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
    Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
    BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiP2C78_ORYSJ
AccessioniPrimary (citable) accession number: Q2QN36
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: January 24, 2006
Last modified: June 24, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.