Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Alpha-amylase

Gene
N/A
Organism
Thermococcus onnurineus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BRENDAi3.2.1.1. 9350.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
OrganismiThermococcus onnurineusImported
Taxonomic identifieri342948 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus

Interactioni

Protein-protein interaction databases

STRINGi523850.TON_1660.

Structurei

3D structure databases

ProteinModelPortaliQ2QC88.
SMRiQ2QC88. Positions 24-458.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2QC88-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARKAAVAVL MAILISMSLF AVPARAETLE NGGVIMQAFY WDVPMGGIWW
60 70 80 90 100
DTIRAKVPEW SQAGIAAIWL PPASKGMSGN YSMGYDPYDY FDLGEYDQKG
110 120 130 140 150
TVETRFGSKD ELISLINTAH AYNMKVVADI VINHRAGGDL EWNPFVNDYT
160 170 180 190 200
WTDFSGVASG KYTACYLDFH PNDVSYADEG TFGGFPDIDH DKEWNQYWLW
210 220 230 240 250
KSNESYAAYL RSIGIDAWRF DYVKGYPAWV VNSWLSYWGG WAVGEYWDTN
260 270 280 290 300
VDALLNWAYS SGAKVFDFPL YYKMDEAFDN NNIPALVDAL RYGQTVVSRD
310 320 330 340 350
PFKAVTFVAN HDTDIIWNKY PAYAFILTYE GQPMIFYRDY EEWLNKDKLI
360 370 380 390 400
NLIWIHDNLA GGSTDIVYYD SDELIFVRSG YGSKPGLITY INLGSSKAGR
410 420 430 440 450
WVYVPKFAGS CIHEYTGNLG GWIDKWVDSS GWVYLEAPAH DPANGQYGYS

VWSYCGVG
Length:458
Mass (Da):51,948
Last modified:January 24, 2006 - v1
Checksum:i850EA05C731B1E6A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ144136 Genomic DNA. Translation: ABA26948.1.
RefSeqiYP_002308047.1. NC_011529.1.

Genome annotation databases

GeneIDi7017329.
KEGGiton:TON_1660.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ144136 Genomic DNA. Translation: ABA26948.1.
RefSeqiYP_002308047.1. NC_011529.1.

3D structure databases

ProteinModelPortaliQ2QC88.
SMRiQ2QC88. Positions 24-458.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi523850.TON_1660.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi7017329.
KEGGiton:TON_1660.

Phylogenomic databases

KOiK01176.

Enzyme and pathway databases

BRENDAi3.2.1.1. 9350.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Overexpression and characterization of an alpha-amylase from a hyperthermophilic archaeon Thermococcus sp. NA1."
    Lim J.K., Lee H.S., Kim Y.J., Jeon J.H., Kang S.G., Lee J.-H.
    Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NA1Imported.

Entry informationi

Entry nameiQ2QC88_9EURY
AccessioniPrimary (citable) accession number: Q2QC88
Entry historyi
Integrated into UniProtKB/TrEMBL: January 24, 2006
Last sequence update: January 24, 2006
Last modified: June 24, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.