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Protein
Submitted name:

Spt20, isoform C

Gene

Spt20

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Spt20, isoform CImported
Gene namesi
Name:Spt20Imported
Synonyms:Dmel\CG17689Imported, lincRNA.S5070Imported
ORF Names:CG17689Imported, Dmel_CG17689Imported
OrganismiDrosophila melanogaster (Fruit fly)Imported
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome 3L

Organism-specific databases

FlyBaseiFBgn0036374 Spt20

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiQ2PDX8

Expressioni

Gene expression databases

BgeeiFBgn0036374
ExpressionAtlasiQ2PDX8 baseline and differential
GenevisibleiQ2PDX8 DM

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili821 – 845Sequence analysisAdd BLAST25

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IJ9A Eukaryota
ENOG410YRYS LUCA
GeneTreeiENSGT00390000013549
KOiK21245
OrthoDBiEOG091G0VSR

Family and domain databases

InterProiView protein in InterPro
IPR021950 Spt20
PANTHERiPTHR13526 PTHR13526, 3 hits
PfamiView protein in Pfam
PF12090 Spt20, 2 hits

Sequencei

Sequence statusi: Complete.

Q2PDX8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQSLDSSCQE ADFIINDTLK KLKGSSNADH VQGLAVHAHG SGVHQTQFVQ
60 70 80 90 100
YGTSGSSPQL QPQQSYHQLH PTLQQQQFAS SSSKSYLETS LLQAIPQIPA
110 120 130 140 150
QPPICIFDDD ESPTEGTGGS LGSLLTEPTS ATPSGLPTAI APSPSSCSSS
160 170 180 190 200
TTTMSNFNSI TSPSPVVPDL LLSTPPGVNS SLSNSSTGAA SVSSKKSEKR
210 220 230 240 250
PPSANSTASG GGHHLHHHHL HQTHNHHVLA SPTSSPSKRQ KSNSSSKESS
260 270 280 290 300
SSSRSSAIPA ASVSTATSSS QSARAGAGAA SSNSNSKPPS SVCQSGNSKF
310 320 330 340 350
FNLHEKIRDL YLQLLSNDLN YFAETGLKQR TRSFTLERLV DREKLNTIVV
360 370 380 390 400
NLYPGNKGYS LALHYDEHMV LNPQTNEWSP TDKDETSSDA AGLGTGTGSH
410 420 430 440 450
RSRPKPLAQD ESQSKTEAGH AKHDFGLVEV LRWPYENDLL LQCIDREMLP
460 470 480 490 500
EFLMDLLVAE TVSLSDGEGT RVYAKPSVFY AGCVIAQIRD FRQTFATSTN
510 520 530 540 550
ICDMKHILLR PTNATLFAEV QQMGSQLPAE DKLALESQLV LATAEPLCLE
560 570 580 590 600
PDPSIGRQAI NSQHQRQLYN SHELRRQMKK FTQTAINRKR KLDQFTHHHG
610 620 630 640 650
LELCDYLARL RQRPRTGSSS GGANATPATA PTNNPLVGAM LSSFTSKVPR
660 670 680 690 700
RPHEVIRPIR PPTLEYPANL KVPEHVISVE KYAKAYEPLN EFSEACKDGC
710 720 730 740 750
QPNCRHNFQP QLVEEYILET EREASEGRRA LYHIKLSIFQ RPSDAEYLGE
760 770 780 790 800
LYVDRDYREG ERNGESCRFA LGTRVHANRY IQQFREIFTE EGRKAVKITH
810 820 830 840 850
LIPGHMPIVT HTGLTNEQRI LLQQQQQQQQ RQAQMQQQQQ QQQQQVVVVA
860 870 880 890 900
NQQQQSQQQQ QTQQAGQQLS ATVHHVALPR QQITQKTLNL AGSNVINVQQ
910 920 930 940 950
NFRQQSAQQQ QPQTYTIEAP QQQAAAQIVP QQQQQQQQQQ QQHIHLQQLA
960 970 980 990 1000
TGSSNTSTTT HQVSLSNGSL VLVQQQQPQQ QSQQLAQALQ HSGITIQPAT
1010 1020 1030 1040 1050
IQQQQQQVKG TSVVGANSAL RAQLNSNVPI LQTQLKVQQQ QIMQKQQQQQ
1060 1070 1080 1090 1100
TTATSNNNNN NNNNNNMNNN TAIHPNPAIN AIVNSIMNSA NQYQQQQQQQ
1110 1120 1130 1140 1150
HQQQHQQQTG NTSSNNNAAG SGGSTNNNGS STSATTLKNS SNASILNLLN
1160 1170 1180 1190 1200
SAPAAMTSTP VASGTFTTST GQQQPQTLTL VQHQQQSTPN TADAATATYV
1210 1220 1230 1240 1250
QTTRGTPTLV STQRKQQSSE VLQNLLNANR KIGGGGTTTT TFRTNSAGNL
1260 1270 1280 1290 1300
IAVNLNQAGQ SHHQQTGDGS QTVRVSMSAL ASQLASPPAV MTNPTTSYTV
1310 1320 1330 1340 1350
ISSGNSAAAA AAWIQSPTGP VQQRILSSLR RDSTTAPPNA IVVGMAAPSP
1360 1370 1380 1390 1400
GSDSNASNAS GFAVPNNLAS TSSGGGGGGG ALSALLTNAA TPSPSGSDHS
1410 1420 1430 1440 1450
QSSQTHQNQA LLERLSNVTS NVSAVSMPHM SPQQPQPTQQ FITKTIVHSP
1460 1470 1480 1490 1500
ATSSIHSPMS SPHPQPSASP QQQQQQQQQQ TTATLNLQGI NLSQLQGAMA
1510 1520 1530 1540 1550
NFAGLQNVQV QIPGFTQPIS LQFSGNSLQQ QQSGNTATGA GTAQGQQRSV
1560 1570 1580 1590 1600
LVSVPVSSQQ QQLPHTITLQ TQSAPHHQQQ HQQTQQQHAP PTGTIVSLPS
1610 1620 1630 1640
SGPGTQTVVI TNNSGGGVTA GSSTSGSAGG GGGSGATTAM LTLPIV
Length:1,646
Mass (Da):176,725
Last modified:June 26, 2013 - v2
Checksum:i101DC49D27D48D46
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014296 Genomic DNA Translation: ABC66150.2
RefSeqiNP_001034005.2, NM_001038916.3
UniGeneiDm.18611

Genome annotation databases

EnsemblMetazoaiFBtr0304904; FBpp0293443; FBgn0036374
FBtr0340705; FBpp0309524; FBgn0036374
GeneIDi39522
KEGGidme:Dmel_CG17689
UCSCiCG17689-RB d. melanogaster

Similar proteinsi

Entry informationi

Entry nameiQ2PDX8_DROME
AccessioniPrimary (citable) accession number: Q2PDX8
Entry historyiIntegrated into UniProtKB/TrEMBL: February 7, 2006
Last sequence update: June 26, 2013
Last modified: June 20, 2018
This is version 96 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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