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Q2PC93 (SSPO_CHICK) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
SCO-spondin
Gene names
Name:SSPO
OrganismGallus gallus (Chicken) [Reference proteome]
Taxonomic identifier9031 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiTestudines + Archosauria groupArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalliformesPhasianidaePhasianinaeGallus

Protein attributes

Sequence length5255 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Involved in the modulation of neuronal aggregation. May be involved in developmental events during the formation of the central nervous system By similarity.

Subcellular location

Secretedextracellular space By similarity.

Sequence similarities

Belongs to the thrombospondin family.

Contains 1 CTCK (C-terminal cystine knot-like) domain.

Contains 2 EGF-like domains.

Contains 1 EMI domain.

Contains 1 F5/8 type C domain.

Contains 13 LDL-receptor class A domains.

Contains 7 TIL (trypsin inhibitory-like) domains.

Contains 27 TSP type-1 domains.

Contains 7 VWFC domains.

Contains 3 VWFD domains.

Ontologies

Keywords
   Biological processCell adhesion
   Cellular componentSecreted
   DomainEGF-like domain
Repeat
Signal
   LigandCalcium
   PTMDisulfide bond
Glycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcell adhesion

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentextracellular space

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1818 Potential
Chain19 – 52555237SCO-spondin
PRO_0000245045

Regions

Domain19 – 11193EMI
Domain193 – 395203VWFD 1
Domain453 – 50856TIL 1
Domain508 – 60194VWFC 1
Domain547 – 755209VWFD 2
Domain809 – 86860TIL 2
Domain868 – 92659VWFC 2
Domain999 – 1207209VWFD 3
Domain1263 – 131957TIL 3
Domain1362 – 139837LDL-receptor class A 1
Domain1400 – 143637LDL-receptor class A 2
Domain1439 – 147739LDL-receptor class A 3
Domain1479 – 151537LDL-receptor class A 4
Domain1515 – 155137LDL-receptor class A 5
Domain1555 – 159339LDL-receptor class A 6
Domain1616 – 165237LDL-receptor class A 7
Domain1654 – 169340LDL-receptor class A 8
Domain1699 – 173436LDL-receptor class A 9
Domain1748 – 179043LDL-receptor class A 10
Domain1789 – 184355TSP type-1 1
Domain1845 – 190359TSP type-1 2
Domain1907 – 196155TIL 4
Domain1919 – 195638EGF-like 1
Domain1957 – 198327EGF-like 2
Domain1961 – 201959VWFC 3
Domain2002 – 205857TSP type-1 3
Domain2058 – 212063VWFC 4
Domain2162 – 2310149F5/8 type C
Domain2327 – 236236LDL-receptor class A 11
Domain2481 – 251737LDL-receptor class A 12
Domain2538 – 257437LDL-receptor class A 13
Domain2575 – 262854TSP type-1 4
Domain2630 – 268556TSP type-1 5
Domain2708 – 275043TIL 5
Domain2790 – 284455TSP type-1 6
Domain2849 – 290355TSP type-1 7
Domain2905 – 295854TSP type-1 8
Domain3020 – 307758VWFC 5
Domain3060 – 311556TSP type-1 9
Domain3117 – 315842TSP type-1 10
Domain3165 – 321753TIL 6
Domain3217 – 327559VWFC 6
Domain3258 – 330952TSP type-1 11
Domain3410 – 347566TSP type-1 12
Domain3477 – 353256TSP type-1 13
Domain3644 – 370057TSP type-1 14
Domain3702 – 375150TSP type-1 15
Domain3878 – 393457TSP type-1 16
Domain3951 – 400454TSP type-1 17
Domain4018 – 407457TSP type-1 18
Domain4076 – 413156TSP type-1 19
Domain4230 – 428253TSP type-1 20
Domain4322 – 438463TSP type-1 21
Domain4386 – 443348TSP type-1 22
Domain4537 – 460872TSP type-1 23
Domain4610 – 466253TSP type-1 24
Domain4762 – 481554TSP type-1 25
Domain4817 – 486953TSP type-1 26
Domain4872 – 492655TIL 7
Domain4979 – 503355TSP type-1 27
Domain5092 – 515059VWFC 7
Domain5161 – 524888CTCK
Compositional bias737 – 7426Poly-Ala

Amino acid modifications

Glycosylation971N-linked (GlcNAc...) Potential
Glycosylation1361N-linked (GlcNAc...) Potential
Glycosylation1561N-linked (GlcNAc...) Potential
Glycosylation2551N-linked (GlcNAc...) Potential
Glycosylation8011N-linked (GlcNAc...) Potential
Glycosylation9311N-linked (GlcNAc...) Potential
Glycosylation9721N-linked (GlcNAc...) Potential
Glycosylation13401N-linked (GlcNAc...) Potential
Glycosylation16101N-linked (GlcNAc...) Potential
Glycosylation16521N-linked (GlcNAc...) Potential
Glycosylation17131N-linked (GlcNAc...) Potential
Glycosylation17431N-linked (GlcNAc...) Potential
Glycosylation18561N-linked (GlcNAc...) Potential
Glycosylation21251N-linked (GlcNAc...) Potential
Glycosylation22301N-linked (GlcNAc...) Potential
Glycosylation27461N-linked (GlcNAc...) Potential
Glycosylation30111N-linked (GlcNAc...) Potential
Glycosylation30421N-linked (GlcNAc...) Potential
Glycosylation30651N-linked (GlcNAc...) Potential
Glycosylation31361N-linked (GlcNAc...) Potential
Glycosylation32381N-linked (GlcNAc...) Potential
Glycosylation32481N-linked (GlcNAc...) Potential
Glycosylation33501N-linked (GlcNAc...) Potential
Glycosylation33661N-linked (GlcNAc...) Potential
Glycosylation33921N-linked (GlcNAc...) Potential
Glycosylation35981N-linked (GlcNAc...) Potential
Glycosylation36251N-linked (GlcNAc...) Potential
Glycosylation38231N-linked (GlcNAc...) Potential
Glycosylation38691N-linked (GlcNAc...) Potential
Glycosylation40181N-linked (GlcNAc...) Potential
Glycosylation41741N-linked (GlcNAc...) Potential
Glycosylation42111N-linked (GlcNAc...) Potential
Glycosylation43621N-linked (GlcNAc...) Potential
Glycosylation44281N-linked (GlcNAc...) Potential
Glycosylation44981N-linked (GlcNAc...) Potential
Glycosylation47301N-linked (GlcNAc...) Potential
Glycosylation47471N-linked (GlcNAc...) Potential
Glycosylation47521N-linked (GlcNAc...) Potential
Glycosylation48671N-linked (GlcNAc...) Potential
Glycosylation49391N-linked (GlcNAc...) Potential
Glycosylation49701N-linked (GlcNAc...) Potential
Glycosylation50811N-linked (GlcNAc...) Potential
Glycosylation51221N-linked (GlcNAc...) Potential
Glycosylation51691N-linked (GlcNAc...) Potential
Disulfide bond1363 ↔ 1376 By similarity
Disulfide bond1370 ↔ 1389 By similarity
Disulfide bond1383 ↔ 1397 By similarity
Disulfide bond1401 ↔ 1413 By similarity
Disulfide bond1408 ↔ 1426 By similarity
Disulfide bond1420 ↔ 1435 By similarity
Disulfide bond1440 ↔ 1452 By similarity
Disulfide bond1447 ↔ 1465 By similarity
Disulfide bond1459 ↔ 1476 By similarity
Disulfide bond1480 ↔ 1492 By similarity
Disulfide bond1487 ↔ 1505 By similarity
Disulfide bond1499 ↔ 1514 By similarity
Disulfide bond1516 ↔ 1528 By similarity
Disulfide bond1523 ↔ 1541 By similarity
Disulfide bond1535 ↔ 1550 By similarity
Disulfide bond1556 ↔ 1568 By similarity
Disulfide bond1563 ↔ 1581 By similarity
Disulfide bond1575 ↔ 1592 By similarity
Disulfide bond1617 ↔ 1629 By similarity
Disulfide bond1624 ↔ 1642 By similarity
Disulfide bond1636 ↔ 1651 By similarity
Disulfide bond1655 ↔ 1668 By similarity
Disulfide bond1662 ↔ 1681 By similarity
Disulfide bond1675 ↔ 1692 By similarity
Disulfide bond1700 ↔ 1711 By similarity
Disulfide bond1706 ↔ 1724 By similarity
Disulfide bond1718 ↔ 1733 By similarity
Disulfide bond1749 ↔ 1759 By similarity
Disulfide bond1754 ↔ 1772 By similarity
Disulfide bond1766 ↔ 1789 By similarity
Disulfide bond1801 ↔ 1837 By similarity
Disulfide bond1805 ↔ 1842 By similarity
Disulfide bond1816 ↔ 1827 By similarity
Disulfide bond1857 ↔ 1897 By similarity
Disulfide bond1861 ↔ 1902 By similarity
Disulfide bond1871 ↔ 1881 By similarity
Disulfide bond2003 ↔ 2042 By similarity
Disulfide bond2014 ↔ 2018 By similarity
Disulfide bond2052 ↔ 2057 By similarity
Disulfide bond2162 ↔ 2310 By similarity
Disulfide bond2328 ↔ 2339 By similarity
Disulfide bond2335 ↔ 2352 By similarity
Disulfide bond2346 ↔ 2361 By similarity
Disulfide bond2482 ↔ 2494 By similarity
Disulfide bond2489 ↔ 2507 By similarity
Disulfide bond2501 ↔ 2516 By similarity
Disulfide bond2539 ↔ 2551 By similarity
Disulfide bond2546 ↔ 2564 By similarity
Disulfide bond2558 ↔ 2573 By similarity
Disulfide bond2576 ↔ 2612 By similarity
Disulfide bond2587 ↔ 2591 By similarity
Disulfide bond2622 ↔ 2627 By similarity
Disulfide bond2642 ↔ 2679 By similarity
Disulfide bond2646 ↔ 2684 By similarity
Disulfide bond2657 ↔ 2669 By similarity
Disulfide bond2791 ↔ 2829 By similarity
Disulfide bond2802 ↔ 2806 By similarity
Disulfide bond2839 ↔ 2843 By similarity
Disulfide bond2861 ↔ 2897 By similarity
Disulfide bond2865 ↔ 2902 By similarity
Disulfide bond2881 ↔ 2887 By similarity
Disulfide bond2917 ↔ 2952 By similarity
Disulfide bond2921 ↔ 2957 By similarity
Disulfide bond2932 ↔ 2942 By similarity
Disulfide bond3061 ↔ 3099 By similarity
Disulfide bond3072 ↔ 3076 By similarity
Disulfide bond3109 ↔ 3114 By similarity
Disulfide bond3270 ↔ 3303 By similarity
Disulfide bond3274 ↔ 3308 By similarity
Disulfide bond3285 ↔ 3293 By similarity
Disulfide bond3422 ↔ 3468 By similarity
Disulfide bond3426 ↔ 3474 By similarity
Disulfide bond3437 ↔ 3449 By similarity
Disulfide bond3489 ↔ 3524 By similarity
Disulfide bond3492 ↔ 3531 By similarity
Disulfide bond3502 ↔ 3514 By similarity
Disulfide bond3656 ↔ 3693 By similarity
Disulfide bond3660 ↔ 3699 By similarity
Disulfide bond3671 ↔ 3683 By similarity
Disulfide bond3714 ↔ 3745 By similarity
Disulfide bond3718 ↔ 3750 By similarity
Disulfide bond3729 ↔ 3735 By similarity
Disulfide bond3890 ↔ 3928 By similarity
Disulfide bond3894 ↔ 3933 By similarity
Disulfide bond3906 ↔ 3918 By similarity
Disulfide bond3963 ↔ 3998 By similarity
Disulfide bond3967 ↔ 4003 By similarity
Disulfide bond3982 ↔ 3988 By similarity
Disulfide bond4019 ↔ 4055 By similarity
Disulfide bond4030 ↔ 4034 By similarity
Disulfide bond4068 ↔ 4073 By similarity
Disulfide bond4088 ↔ 4125 By similarity
Disulfide bond4092 ↔ 4130 By similarity
Disulfide bond4103 ↔ 4115 By similarity
Disulfide bond4231 ↔ 4266 By similarity
Disulfide bond4242 ↔ 4246 By similarity
Disulfide bond4276 ↔ 4281 By similarity
Disulfide bond4387 ↔ 4417 By similarity
Disulfide bond4398 ↔ 4400 By similarity
Disulfide bond4427 ↔ 4432 By similarity
Disulfide bond4548 ↔ 4601 By similarity
Disulfide bond4551 ↔ 4607 By similarity
Disulfide bond4575 ↔ 4591 By similarity
Disulfide bond4611 ↔ 4646 By similarity
Disulfide bond4622 ↔ 4626 By similarity
Disulfide bond4656 ↔ 4661 By similarity
Disulfide bond4774 ↔ 4809 By similarity
Disulfide bond4778 ↔ 4814 By similarity
Disulfide bond4789 ↔ 4798 By similarity
Disulfide bond4818 ↔ 4852 By similarity
Disulfide bond4829 ↔ 4833 By similarity
Disulfide bond4863 ↔ 4868 By similarity
Disulfide bond4980 ↔ 5017 By similarity
Disulfide bond4991 ↔ 4995 By similarity
Disulfide bond5027 ↔ 5032 By similarity
Disulfide bond5161 ↔ 5209 By similarity
Disulfide bond5175 ↔ 5226 By similarity
Disulfide bond5185 ↔ 5242 By similarity
Disulfide bond5189 ↔ 5244 By similarity
Disulfide bond? ↔ 5247 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q2PC93 [UniParc].

Last modified February 7, 2006. Version 1.
Checksum: DBE892EA9AA0378B

FASTA5,255560,556
        10         20         30         40         50         60 
MGIVATVLLW VVTEAARGRW CERTEQVTEE EVVMPRREDV VPCPSMYQYS LAGWRIDLNR 

        70         80         90        100        110        120 
MRQVYGGERG VPPTSTHPGA AMCYIYRPPE TQLVVRNRTV RACCAGWSGP HCTEVEGSLG 

       130        140        150        160        170        180 
QCHASWQCQD ALGAHNLSTV SMAECCRQPW GHSWRNGSSA LCFACSRQPL TGDVPLPTAP 

       190        200        210        220        230        240 
RGPAARHRGP TASCTVWAGS RYRSFDGRHF GFQGECAYSL AASTDSTWAV SITPGSPPVL 

       250        260        270        280        290        300 
HMTFGLDTVV AQGHNISVNG VAVPEGRQHL HGGISVTWLG DFVAVESGLG VHLKLDGRGT 

       310        320        330        340        350        360 
VYVTVSAELR GSTKGLCGPY NDDPIDDFLR VEGDVAPLAA SFGNSWRIPD ANPELSCSDA 

       370        380        390        400        410        420 
VEPSPGCAMG STAQRAAEAM CGMLLTDPFR QCHEAVDPHG FYEACLELHC REGGTGPSPP 

       430        440        450        460        470        480 
PAVCDTLATY VRDCAQRRAY IEWRRPGLCE QQCGHGQRYS DCVSSCPASC MAAGTAEEGH 

       490        500        510        520        530        540 
CRDDCASGCE CTPGLLLDRG ACIPQSACPC LHRGHIYAPG QSIRQRCNQC TCRGGRWLCT 

       550        560        570        580        590        600 
QDRCAAECAV LGDLHYITFD RRRFSFPGAC EYTLVQDFVE GTLRITAEQE ACGGHQPLSC 

       610        620        630        640        650        660 
LRALSITVPG ASARLHSTGE VVVDGRVVPL PFASAALTVR RASSSFLLLQ TFGAHLLWGL 

       670        680        690        700        710        720 
ETPAAYITLQ PAFANKVRGL CGTYNWDQRD DFATPAGDVE VGVTAFANKY RVSTDCPVLS 

       730        740        750        760        770        780 
PVPFEPCSTY APRRELAAAA CAILHGASFQ PCHHLVDREP FHQLCLYDVC ACPAGKHCLC 

       790        800        810        820        830        840 
PALAAYAREC AQEGAALSWR NESFCGTQCR GGQVYQECSS PCGRTCADLR LDGASSCPSL 

       850        860        870        880        890        900 
DNICVSGCNC PEGPVLDDGG QCVPPGVCPC QHSSQLYPAG SKIRQGCNAC MCTAGTWSCT 

       910        920        930        940        950        960 
DAPCPDAAFC PGDLVYVFGS CLRTCDSAEP NGTCTGIADG CVCPPGTVFL DERCVPPEEC 

       970        980        990       1000       1010       1020 
PCQHNGRLYH PNDTIVRDCN TCVCRQQRWQ CSSEDCMGTC VATGDPHYIT FDGRAFSFLG 

      1030       1040       1050       1060       1070       1080 
DCEYVLVREA NGLFTVTAEN VPCGTSGVTC TKSVVVEMGN TVVHMLRGRD VTVNGVSVRP 

      1090       1100       1110       1120       1130       1140 
PKVYSGNGLT LQRAGIFLLL LSRLGLAVLW DGGTRVYIRL QPQHRGRVVG LCGNFDRDAE 

      1150       1160       1170       1180       1190       1200 
NDLASQQGVL EPTAELFGNS WRVSLLCPEV DGTTAQHPCT DNPHRATWAR KRCSILTQRL 

      1210       1220       1230       1240       1250       1260 
FAPCHDEVPC QHFYDWCIFD ACGCDSGGDC ECLCTAIATY AEECSQRGIH IRWRSQDLCP 

      1270       1280       1290       1300       1310       1320 
MQCDGGQEYS ACGPPCPQTC RNLGLELPEH CDTMSCLEGC FCPEGKVLHE GSCIDPAECP 

      1330       1340       1350       1360       1370       1380 
CFWQGIAFPD SAVVQQGCRN CSCTAGLWQC VPTAEPCPAQ PHCPDSEFPC RSGGRCVPGA 

      1390       1400       1410       1420       1430       1440 
WLCDNEDDCG DGSDEVCALH CAPHQHRCAD GQCVPWGARC DGLSDCGDGS DERGCPPPPC 

      1450       1460       1470       1480       1490       1500 
APPEFRCASG RCIPRAHVCN GELDCGFADD SDEAGCSPSC SVGEFQCAAG RCVPYPHRCN 

      1510       1520       1530       1540       1550       1560 
GHDDCGDFSD ERGCVCPAGH FQCPDAQCLP PAALCDGMQD CGDGTDEAFC PDRITCAPGQ 

      1570       1580       1590       1600       1610       1620 
LPCPDGSCVS QVKLCDGIWD CRDGWDESSV RCMVSWAPPA PTQLPTVPAN GTAAPVCGPY 

      1630       1640       1650       1660       1670       1680 
EFPCRSGQCV PRGWVCDSEA DCPDNSDELG CNRSCVLGHF PCALGAHCIH YDHLCDGIPH 

      1690       1700       1710       1720       1730       1740 
CPDHSDESDD NCGSTQIPPC PGHFVCNNRV CVNATRVCDG ALDCPQGEDE LACEGYVPTG 

      1750       1760       1770       1780       1790       1800 
ERNQTVGPCA EYSCRDGDCI TFKQVCNGLP DCRDGDMASG WLPSDEWDCG QWGPWAPWGI 

      1810       1820       1830       1840       1850       1860 
CSHSCGLGQQ LRARECSQRT PGVLHQCHGE ATQARPCFST ACPVDGAWSE WTMWSNCTQG 

      1870       1880       1890       1900       1910       1920 
CEGVVVRQRH CQPPRDGGRP CAALPATAHA TLEIGTCQQD GCPPASCPGG LQPRPCAPCP 

      1930       1940       1950       1960       1970       1980 
ASCADLASRA PCRREQCTPG CWCAEGLVLD GERGCVRPRE CRCEVDGLRY WPGQRMKLNC 

      1990       2000       2010       2020       2030       2040 
RLCTCLDGQP RRCRHNPACS VSCSWSAWSP WGECLGPCGV QSIQWSFRSP SHPGKHGTNR 

      2050       2060       2070       2080       2090       2100 
QCRGIYRKAR RCQTEPCQEC EHQGRSRAQG DRWRWGPCHV CQCLPGPEVR CSPYCARSAV 

      2110       2120       2130       2140       2150       2160 
GCPQGQVLVE GKGDSCCFCA QIGDNVTAIP TALTMEPPST MPGEPSDSPL PTFPLPSPGD 

      2170       2180       2190       2200       2210       2220 
PCYSPLGIAS LPDSSFTASA EQQQHPARAA RLHHVSPGLE LQGWAPPADT VPGLPSHLPF 

      2230       2240       2250       2260       2270       2280 
LQLDLLQTTN LTGVVVQGAG AGDAFITAFQ LQFSTDGNRW HNYQQLFQGN WDATTPVVQP 

      2290       2300       2310       2320       2330       2340 
LDHMVQARYI RILPQGFHNA IFLRAELLGC PTVPLDLAVT TAVTPAPCGT GEFWCGVSCV 

      2350       2360       2370       2380       2390       2400 
TASRRCDGAT DCPGGADEAG CEPPSSTTLP THPASLTTPG SAGILGLTAE PPVAPPAAVP 

      2410       2420       2430       2440       2450       2460 
EGTSAWLTVG STSPAVPSTT GLPGVPTATI TPRGPPSAGP PSPGMAAVTV SHPVMGPPAL 

      2470       2480       2490       2500       2510       2520 
PMPPTGVPTP TSAEPPLPRL LCPPDQFLCD ALGCVDAAMV CDGQQDCLDG SDEAHCGALP 

      2530       2540       2550       2560       2570       2580 
TSGSSPSPLA WPSSPPPTCS PKQFSCGTGE CLALEKRCDL SRDCADGSDE SSCADCILSP 

      2590       2600       2610       2620       2630       2640 
WGGWSQCSHS CGLGVTSRQR VLLRGALPGG TCHTPRLDTR ACFLRACPVP GAWAAWGVWS 

      2650       2660       2670       2680       2690       2700 
SCDAECGGGM RSRTRSCTDP PPKNGGQPCA GEALQSQPCN LQPCGDTREC GPGMVLVQEG 

      2710       2720       2730       2740       2750       2760 
DCVQGLVPPC PQVCGDLSAT SSCQSPCQEG CRCPPGLFLQ EGTCVNASQC HCHQGQQRWL 

      2770       2780       2790       2800       2810       2820 
PSQVFLRDGC SQCVCRDGVV TCEDTACPIA CAWSAWSLWT LCDRSCGVGM QERFRSPSNP 

      2830       2840       2850       2860       2870       2880 
AAANGGAPCD GDTREVRECH TPCATAEPSS GWSSWTPWSP CSRSCFHHVD QRGRRHRFRH 

      2890       2900       2910       2920       2930       2940 
CEGMGTCPGL GVQEEPCDTA PCPVAGVWMP WSAWSECSAP CDAGVQTRSR TCTPPAFGGA 

      2950       2960       2970       2980       2990       3000 
ECTGPHLQTR NCNTRPCGAQ CPDTMQYLTA EECRHSEGRC PWICQDLGAG VACTAQCQPG 

      3010       3020       3030       3040       3050       3060 
CHCPAGLLLQ NGTCVPPSHC LCHHRGHLYQ PGDINALDTC NNCTCVTGQM VCSTETCPVP 

      3070       3080       3090       3100       3110       3120 
CTWSNWTAWS TCSHSCDVGM RRRYRVPIVP PLAGGGPPCQ GPSMEVEFCS LQPCRAVAPW 

      3130       3140       3150       3160       3170       3180 
GPWSECSVSC GGGYRNRTRD GPPLHSLEFS TCNPAPCPGK EPGVCPPGKQ WQACAQGAAS 

      3190       3200       3210       3220       3230       3240 
CAELSAAPPA DGSCHPGCYC PPGALLLNNE CVAEAACPCA VDGVLYQPGD VVPQGCHNCS 

      3250       3260       3270       3280       3290       3300 
CIAGRVTNCS QEDCGDVDGP WTPWTPWSEC SASCGPGRQR RYRFCSAHPG VPCAEPQPQE 

      3310       3320       3330       3340       3350       3360 
RPCARQPCHS PDCAAVPGSV FSHCRPPCPR SCDDISHCVW HRQPGCYCTN GTLLDATGTA 

      3370       3380       3390       3400       3410       3420 
CVALENCTCL DAHSGQRHQP GQSVPRGDGC NNCTCTQGRL LCTGLPCPVP GAWCEWSPWT 

      3430       3440       3450       3460       3470       3480 
PCSRSCGDEA ATRHRVCSCP APQQGGAGCP GGLEGHGDTG MQLQHQECPS VPPCPEDGAW 

      3490       3500       3510       3520       3530       3540 
AAWGPWSGCG GCGGQAVRTR SCSSPPARFG GLPCAGEARQ SRACPWATSS CPECAGGLVA 

      3550       3560       3570       3580       3590       3600 
FTCGKPCPHS CEDLREDTAC MATPRCLPAC ACPHGQLLQD GDCVPPELCR CAWAPSKNGS 

      3610       3620       3630       3640       3650       3660 
IWEQDGAVPM QELQPGETVQ RHCQNCTCKS GTLQCHAEPG CRADGGWSPW GPWSPCSPGC 

      3670       3680       3690       3700       3710       3720 
QAGTQLASRQ CNNPTPQLGG RGCSGHSQRQ RPCPATEGCP EEEPWGEWSP WGPCSASCGG 

      3730       3740       3750       3760       3770       3780 
GEQLRHRDCP PPGGCPGLAL QSKTCNTHVC REAGCPPGRL YRECQQGEGC PYSCAHLAGR 

      3790       3800       3810       3820       3830       3840 
IACFPGGCQE GCHCPTGTLL HHGHCLQECP CVLTAEVLRK LRNSSADLQA APHLLGTRGP 

      3850       3860       3870       3880       3890       3900 
PLALDQELPP GSTIHSACTS CTCLHGRLNC SEPVCPRDGG FSPWGPWSSC SRSCGGLGVM 

      3910       3920       3930       3940       3950       3960 
TRRRGCTNPE PARGGRDCAG PRSDSKYCQS PECPAVPTTE PGPGVAGAEE EEGFGPWSPW 

      3970       3980       3990       4000       4010       4020 
SPCSKTCTHP ERPATKTRER PCVGTAVCSG DGFQEQPCNL PLCSDVPPCQ GEDCAGLNCS 

      4030       4040       4050       4060       4070       4080 
WAPWGPWTEC SRSCGVGRQQ RLRAYSPPGA SGRWCPGILS AFVQRRFCSL QACKVDGAWS 

      4090       4100       4110       4120       4130       4140 
AWSPWSRCDR TCGGGRAVRT RSCTRPPPKN GGQRCPGERH QLHLCNAQPC DDSCPPGMAL 

      4150       4160       4170       4180       4190       4200 
VTCANHCPRH CGDLQEGIVC REEEHCEPGC RCPNGTLEQD GGCVPLAHCE CTDAQGHGWV 

      4210       4220       4230       4240       4250       4260 
PGSTHHDGCN NCTCLEGRLR CTDRLCPPLR CPWSRWSRWS PCSVTCGDGQ QTRFRTPTAG 

      4270       4280       4290       4300       4310       4320 
SWDEECQGEQ MENRGCAAGP CPPLCPQGSW ERRLGDMWLQ GECQRCTCTP EGTVCEDTTC 

      4330       4340       4350       4360       4370       4380 
AGAEHCTWGT WSPCSRSCGT GLASREGSCP CPFPGPPGAV CNASTGDGAR PHREVQACYL 

      4390       4400       4410       4420       4430       4440 
RPCPAECSWS AWSSWGGCSC SSPLQHRYRH RHGTGLCVGL DVELHPCNTS GCSESSCEPP 

      4450       4460       4470       4480       4490       4500 
FEFQPCSPPC ARLCSTLQHP ELCPAQSHCL PGCFCPQGLL EQRSACVPPE QCDCLHTNES 

      4510       4520       4530       4540       4550       4560 
GDLVTLSPGD IILLGCKECV CQDGALQCSS EGCQGLLPLS PWSEWTPCST CLPLFPSHLG 

      4570       4580       4590       4600       4610       4620 
DATPHVSVQH RYRACLDPQS GQPWSGDTAV CSAELQQQRL CPDPDICQEL CLWSPWGPWG 

      4630       4640       4650       4660       4670       4680 
PCQQPCSGSF RLRHRHLQRL AGSGQCQGAQ TQSESCNTAV CPGEDCEKQG RVFATTCANS 

      4690       4700       4710       4720       4730       4740 
CPRACADLWQ HVECVQGGCK PGCRCPQGQL LQDGLCVPTA QCRCGLSGDN GTQELWPGQE 

      4750       4760       4770       4780       4790       4800 
ATIECHNCTC ENGTMVCPAL PCPSYGPWST WSPCSSSCGS GRTSRHRTCE PNPGGVPCMA 

      4810       4820       4830       4840       4850       4860 
SGMQETAECS PQPCPAGCQL SPWSPWSPCS SSCGGGRSER SRELLGGEEE PCPIPALRQH 

      4870       4880       4890       4900       4910       4920 
RVCNVHNCTQ ECPRSQVHRE CANACPHACA DLRPQTQCLP QPCQPGCACP PGQVLQDGAC 

      4930       4940       4950       4960       4970       4980 
VPPEECRCTL DSTMPGVLNL SREEQEQEHA PGSRLQHRCN TCICIRGTFN CSQEECNVDC 

      4990       5000       5010       5020       5030       5040 
LWSPWSPWSP CSVTCGMGER LSHRHPLRQR LYEGAECLGP PVRRAACHLP DCACPEGERW 

      5050       5060       5070       5080       5090       5100 
QGHEVPPGCE QSCRDILDET PANCTPSPSP GCTCEPGHYR NSSGHCVPST LCECLHQGQL 

      5110       5120       5130       5140       5150       5160 
HQPGSEWQEQ CARCRCVDGK ANCTDGCTPL SCPEGEVKVR EPGRCCPVCR MEWPEEPSSM 

      5170       5180       5190       5200       5210       5220 
CRRFTELRNI TKGPCSLPNV EVSFCSGRCP SRTAVTPEEP YLQTLCECCS YRLDPGSPVR 

      5230       5240       5250 
ILSLPCAGGA AEPVVLPIIH SCECSSCQGG DFSKR 

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References

[1]"Characterization of SCO-spondin in chick embryos."
Didier R.
Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Tissue: CNS.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ866919 mRNA. Translation: CAI29216.1.
RefSeqNP_001006351.2. NM_001006351.2.
UniGeneGga.33700.
Gga.52789.

3D structure databases

ProteinModelPortalQ2PC93.
SMRQ2PC93. Positions 3059-3085.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING9031.ENSGALP00000038585.

Proteomic databases

PaxDbQ2PC93.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID420367.
KEGGgga:420367.

Organism-specific databases

CTD23145.

Phylogenomic databases

eggNOGNOG12793.
HOVERGENHBG080794.
PhylomeDBQ2PC93.

Family and domain databases

Gene3D2.60.120.260. 1 hit.
4.10.400.10. 13 hits.
InterProIPR000421. Coagulation_fac_5/8-C_type_dom.
IPR006207. Cys_knot_C.
IPR008979. Galactose-bd-like.
IPR023415. LDLR_class-A_CS.
IPR002172. LDrepeatLR_classA_rpt.
IPR000884. Thrombospondin_1_rpt.
IPR002919. TIL_dom.
IPR014853. Unchr_dom_Cys-rich.
IPR001007. VWF_C.
IPR001846. VWF_type-D.
[Graphical view]
PfamPF08742. C8. 3 hits.
PF00754. F5_F8_type_C. 1 hit.
PF00057. Ldl_recept_a. 11 hits.
PF01826. TIL. 13 hits.
PF00090. TSP_1. 25 hits.
PF00093. VWC. 1 hit.
PF00094. VWD. 3 hits.
[Graphical view]
PRINTSPR00261. LDLRECEPTOR.
SMARTSM00832. C8. 3 hits.
SM00231. FA58C. 1 hit.
SM00192. LDLa. 13 hits.
SM00209. TSP1. 27 hits.
SM00214. VWC. 5 hits.
SM00216. VWD. 3 hits.
[Graphical view]
SUPFAMSSF49785. SSF49785. 1 hit.
SSF57424. SSF57424. 12 hits.
SSF57567. SSF57567. 15 hits.
SSF82895. SSF82895. 25 hits.
PROSITEPS01225. CTCK_2. 1 hit.
PS01285. FA58C_1. 1 hit.
PS01286. FA58C_2. 1 hit.
PS50022. FA58C_3. 1 hit.
PS01209. LDLRA_1. 11 hits.
PS50068. LDLRA_2. 13 hits.
PS50092. TSP1. 27 hits.
PS01208. VWFC_1. 1 hit.
PS50184. VWFC_2. 2 hits.
PS51233. VWFD. 3 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio20823284.

Entry information

Entry nameSSPO_CHICK
AccessionPrimary (citable) accession number: Q2PC93
Entry history
Integrated into UniProtKB/Swiss-Prot: July 11, 2006
Last sequence update: February 7, 2006
Last modified: June 11, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families