Q2P7U2 (Q2P7U2_XANOM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
D-amino acid dehydrogenase small subunit HAMAP MF_01202
EC=1.4.99.1 HAMAP MF_01202

Gene names

Name:	dadA HAMAP MF_01202
Ordered Locus Names:	XOO0630

Organism

Xanthomonas oryzae pv. oryzae (strain MAFF 311018) [Complete proteome] [HAMAP]

Taxonomic identifier

342109 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length	429 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Oxidative deamination of D-amino acids By similarity. HAMAP MF_01202 SAAS SAAS023080
Catalytic activity	A D-amino acid + H2O + acceptor = a 2-oxo acid + NH3 + reduced acceptor. HAMAP MF_01202 SAAS SAAS023080
Cofactor	FAD By similarity. HAMAP MF_01202 SAAS SAAS023080
Pathway	Amino-acid degradation; D-alanine degradation; NH(3) and pyruvate from D-alanine: step 1/1. HAMAP MF_01202
Subunit structure	Heterodimer of a small and a large subunit By similarity. HAMAP MF_01202 SAAS SAAS023080
Sequence similarities	Belongs to the DadA oxidoreductase family. HAMAP MF_01202

Ontologies

Keywords
Ligand	FAD HAMAP MF_01202 SAAS SAAS023080 Flavoprotein HAMAP MF_01202 SAAS SAAS023080
Molecular function	Oxidoreductase HAMAP MF_01202 SAAS SAAS023080
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	alanine catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	D-amino-acid dehydrogenase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Nucleotide binding	3 – 17	15	FAD By similarity HAMAP MF_01202

Sequences

	Sequence		Length	Mass (Da)
	Q2P7U2 [UniParc]. Last modified February 7, 2006. Version 1. Checksum: A6290CCE351A174A	FASTA	429	46,673
	10 20 30 40 50 60 MRVLILGSGV IGVTSAWYLA QAGCEVTVVD RQPAAALETS YANAGQLSFG YTSPWAAPGV 70 80 90 100 110 120 PGKAVKWLFE QHAPLSIRPT RDLRQLAWLS QMLRNCTAER YAVNKARMVR MSDYSRDCLN 130 140 150 160 170 180 ALRAETGIEF EGRQLGTTQL FRTQQQLDAA AQDIEVLAQY GVPYELLSPA QIAQFEPGLA 190 200 210 220 230 240 GGGAQMAGAL RLPEDQTGDC RLFTQRLAEL AAQAGVTFRY GYQIEWLEHA GGQVTGVQID 250 260 270 280 290 300 GRIETADRYV LALGSYSADL LLSLGLHLPV YPLKGYSLTI PIVDAQRAPT STVLDESYKI 310 320 330 340 350 360 ALTRFDDRIR VGGMAEVAGF DMSLNPRRRA TLEMVVNDLF PGGGDLAQAE FWTGLRPATP 370 380 390 400 410 420 DGTPVVGATP YANLFLNTGH GTLGWTMACG SGRYLADLMQ GRTPEIDTDG LDIFRYLSPR SARPQREAA

References

[1]

"Genome sequence of Xanthomonas oryzae pv. oryzae suggests contribution of large numbers of effector genes and insertion sequences to its race diversity." Ochiai H., Inoue Y., Takeya M., Sasaki A., Kaku H. Jpn. Agric. Res. Q. 39:275-287(2005) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008229 Genomic DNA. Translation: BAE67385.1.
RefSeq	YP_449659.1. NC_007705.1.
3D structure databases
ProteinModelPortal	Q2P7U2.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2P7U2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3857816.
GenomeReviews	Gene locus XOO0630 in contig AP008229_GR.
KEGG	xom:XOO_0630.
PATRIC	24110543. VBIXanOry49434_0714.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0665.
HOGENOM	HBG729204.
OMA	LEHAGGQ.
PhylomeDB	Q2P7U2.
ProtClustDB	PRK00711.
Enzyme and pathway databases
BioCyc	XORY342109:XOO0630-MONOMER.
Family and domain databases
HAMAP	MF_01202. DadA. [Tree]
InterPro	IPR023080. D-aa_DH_ssu_DadA. IPR006076. FAD-dep_OxRdtase. [Graphical view]
KO	K00285.
Pfam	PF01266. DAO. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q2P7U2_XANOM

Accession

Primary (citable) accession number: Q2P7U2

Entry history

Integrated into UniProtKB/TrEMBL:	February 7, 2006
Last sequence update:	February 7, 2006
Last modified:	December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)