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Q2P4K1 (Q2P4K1_XANOM) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length534 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL BAE68526.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q2P4K1 [UniParc].

Last modified February 7, 2006. Version 1.
Checksum: 7A122637AE72DF2B

FASTA53459,859
        10         20         30         40         50         60 
MKRFAALYRT LDRSTGTLDK RAALVAYFRD APALDAAWAL YLLAGGKVAS ARMRIAGSGE 

        70         80         90        100        110        120 
LREWITDTAG IADWLVADSY DHVGDLAETL ALLLDDPVTE AADLPLAEWI EQRLLPIANK 

       130        140        150        160        170        180 
DVEVRKACIV QAWRSLAFDE RLVFNKLLTG ALRVGVSQRL VQQALAELSG MDTARIAQRM 

       190        200        210        220        230        240 
LGSWRPHPTY LAELLTREEL PGDRQQPYPF FLASPLEAEV QTLGAIDDWL LEWKWDGIRL 

       250        260        270        280        290        300 
QLIRRAGEAA LWSRGEERLD GRFPEIEHAA LQLPDGTVID GELLAWQPEQ SLPMPFTALQ 

       310        320        330        340        350        360 
TRIQRLKPGP KTLTAAPARV VAYDLLELDG ADLRGRPLQE RRGLLEGVLT TLADPRIVAS 

       370        380        390        400        410        420 
PLVQVSDWHA AAQVRVEARE RGVEGLMLKR AGSVYQSGRR RGDWWKWKID PLTIDAVLLY 

       430        440        450        460        470        480 
AQAGHGRRST LYTDYTFGLW HEGQLVPIAK AYSGLDDSEI LQLDRWIRAN TTERFGPVRA 

       490        500        510        520        530 
VTAHHVFELG VEAVNRSARH KSGIAVRFPR ILRWRQDKPM ADADHLSSLQ ALAR 

« Hide

References

[1]"Genome sequence of Xanthomonas oryzae pv. oryzae suggests contribution of large numbers of effector genes and insertion sequences to its race diversity."
Ochiai H., Inoue Y., Takeya M., Sasaki A., Kaku H.
Jpn. Agric. Res. Q. 39:275-287(2005)
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MAFF 311018.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP008229 Genomic DNA. Translation: BAE68526.1.
RefSeqYP_450800.1. NC_007705.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING342109.XOO_1771.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAE68526; BAE68526; BAE68526.
GeneID3857397.
KEGGxom:XOO_1771.
PATRIC24113113. VBIXanOry49434_1986.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000260707.
KOK01971.
OMAKSASTHN.
OrthoDBEOG6Q8HXT.

Enzyme and pathway databases

BioCycXORY342109:GIX9-1797-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2P4K1_XANOM
AccessionPrimary (citable) accession number: Q2P4K1
Entry history
Integrated into UniProtKB/TrEMBL: February 7, 2006
Last sequence update: February 7, 2006
Last modified: May 14, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)