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Q2P4K1

- Q2P4K1_XANOM

UniProt

Q2P4K1 - Q2P4K1_XANOM

Protein
Submitted name:

DNA ligase

Gene

XOO1771

Organism
Xanthomonas oryzae pv. oryzae (strain MAFF 311018)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 55 (01 Oct 2014)
      Sequence version 1 (07 Feb 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciXORY342109:GIX9-1797-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligaseImported
    Gene namesi
    Ordered Locus Names:XOO1771Imported
    OrganismiXanthomonas oryzae pv. oryzae (strain MAFF 311018)Imported
    Taxonomic identifieri342109 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
    ProteomesiUP000001957: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi342109.XOO_1771.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000260707.
    KOiK01971.
    OMAiKSASTHN.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q2P4K1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKRFAALYRT LDRSTGTLDK RAALVAYFRD APALDAAWAL YLLAGGKVAS    50
    ARMRIAGSGE LREWITDTAG IADWLVADSY DHVGDLAETL ALLLDDPVTE 100
    AADLPLAEWI EQRLLPIANK DVEVRKACIV QAWRSLAFDE RLVFNKLLTG 150
    ALRVGVSQRL VQQALAELSG MDTARIAQRM LGSWRPHPTY LAELLTREEL 200
    PGDRQQPYPF FLASPLEAEV QTLGAIDDWL LEWKWDGIRL QLIRRAGEAA 250
    LWSRGEERLD GRFPEIEHAA LQLPDGTVID GELLAWQPEQ SLPMPFTALQ 300
    TRIQRLKPGP KTLTAAPARV VAYDLLELDG ADLRGRPLQE RRGLLEGVLT 350
    TLADPRIVAS PLVQVSDWHA AAQVRVEARE RGVEGLMLKR AGSVYQSGRR 400
    RGDWWKWKID PLTIDAVLLY AQAGHGRRST LYTDYTFGLW HEGQLVPIAK 450
    AYSGLDDSEI LQLDRWIRAN TTERFGPVRA VTAHHVFELG VEAVNRSARH 500
    KSGIAVRFPR ILRWRQDKPM ADADHLSSLQ ALAR 534
    Length:534
    Mass (Da):59,859
    Last modified:February 7, 2006 - v1
    Checksum:i7A122637AE72DF2B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008229 Genomic DNA. Translation: BAE68526.1.
    RefSeqiYP_450800.1. NC_007705.1.

    Genome annotation databases

    EnsemblBacteriaiBAE68526; BAE68526; BAE68526.
    GeneIDi3857397.
    KEGGixom:XOO_1771.
    PATRICi24113113. VBIXanOry49434_1986.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008229 Genomic DNA. Translation: BAE68526.1 .
    RefSeqi YP_450800.1. NC_007705.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 342109.XOO_1771.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAE68526 ; BAE68526 ; BAE68526 .
    GeneIDi 3857397.
    KEGGi xom:XOO_1771.
    PATRICi 24113113. VBIXanOry49434_1986.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000260707.
    KOi K01971.
    OMAi KSASTHN.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci XORY342109:GIX9-1797-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of Xanthomonas oryzae pv. oryzae suggests contribution of large numbers of effector genes and insertion sequences to its race diversity."
      Ochiai H., Inoue Y., Takeya M., Sasaki A., Kaku H.
      Jpn. Agric. Res. Q. 39:275-287(2005)
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: MAFF 311018Imported.

    Entry informationi

    Entry nameiQ2P4K1_XANOM
    AccessioniPrimary (citable) accession number: Q2P4K1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 7, 2006
    Last sequence update: February 7, 2006
    Last modified: October 1, 2014
    This is version 55 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3