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Q2P4K1

- Q2P4K1_XANOM

UniProt

Q2P4K1 - Q2P4K1_XANOM

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Protein
Submitted name:

DNA ligase

Gene

XOO1771

Organism
Xanthomonas oryzae pv. oryzae (strain MAFF 311018)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciXORY342109:GIX9-1797-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported
Gene namesi
Ordered Locus Names:XOO1771Imported
OrganismiXanthomonas oryzae pv. oryzae (strain MAFF 311018)Imported
Taxonomic identifieri342109 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
ProteomesiUP000001957: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi342109.XOO_1771.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000260707.
KOiK01971.
OMAiKSASTHN.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2P4K1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MKRFAALYRT LDRSTGTLDK RAALVAYFRD APALDAAWAL YLLAGGKVAS
60 70 80 90 100
ARMRIAGSGE LREWITDTAG IADWLVADSY DHVGDLAETL ALLLDDPVTE
110 120 130 140 150
AADLPLAEWI EQRLLPIANK DVEVRKACIV QAWRSLAFDE RLVFNKLLTG
160 170 180 190 200
ALRVGVSQRL VQQALAELSG MDTARIAQRM LGSWRPHPTY LAELLTREEL
210 220 230 240 250
PGDRQQPYPF FLASPLEAEV QTLGAIDDWL LEWKWDGIRL QLIRRAGEAA
260 270 280 290 300
LWSRGEERLD GRFPEIEHAA LQLPDGTVID GELLAWQPEQ SLPMPFTALQ
310 320 330 340 350
TRIQRLKPGP KTLTAAPARV VAYDLLELDG ADLRGRPLQE RRGLLEGVLT
360 370 380 390 400
TLADPRIVAS PLVQVSDWHA AAQVRVEARE RGVEGLMLKR AGSVYQSGRR
410 420 430 440 450
RGDWWKWKID PLTIDAVLLY AQAGHGRRST LYTDYTFGLW HEGQLVPIAK
460 470 480 490 500
AYSGLDDSEI LQLDRWIRAN TTERFGPVRA VTAHHVFELG VEAVNRSARH
510 520 530
KSGIAVRFPR ILRWRQDKPM ADADHLSSLQ ALAR
Length:534
Mass (Da):59,859
Last modified:February 7, 2006 - v1
Checksum:i7A122637AE72DF2B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008229 Genomic DNA. Translation: BAE68526.1.
RefSeqiWP_011408264.1. NC_007705.1.
YP_450800.1. NC_007705.1.

Genome annotation databases

EnsemblBacteriaiBAE68526; BAE68526; BAE68526.
GeneIDi3857397.
KEGGixom:XOO_1771.
PATRICi24113113. VBIXanOry49434_1986.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008229 Genomic DNA. Translation: BAE68526.1 .
RefSeqi WP_011408264.1. NC_007705.1.
YP_450800.1. NC_007705.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 342109.XOO_1771.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAE68526 ; BAE68526 ; BAE68526 .
GeneIDi 3857397.
KEGGi xom:XOO_1771.
PATRICi 24113113. VBIXanOry49434_1986.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000260707.
KOi K01971.
OMAi KSASTHN.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci XORY342109:GIX9-1797-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of Xanthomonas oryzae pv. oryzae suggests contribution of large numbers of effector genes and insertion sequences to its race diversity."
    Ochiai H., Inoue Y., Takeya M., Sasaki A., Kaku H.
    Jpn. Agric. Res. Q. 39:275-287(2005)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MAFF 311018Imported.

Entry informationi

Entry nameiQ2P4K1_XANOM
AccessioniPrimary (citable) accession number: Q2P4K1
Entry historyi
Integrated into UniProtKB/TrEMBL: February 7, 2006
Last sequence update: February 7, 2006
Last modified: October 29, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3