Q2P4K1 (Q2P4K1_XANOM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA ligase EMBL BAE68526.1

Gene names

Ordered Locus Names:

XOO1771

Organism

Xanthomonas oryzae pv. oryzae (strain MAFF 311018) [Complete proteome] [HAMAP]

Taxonomic identifier

342109 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas › Xanthomonas oryzae › Xanthomonas oryzae pv. oryzae

Protein attributes

Sequence length	534 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL BAE68526.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2P4K1 [UniParc]. Last modified February 7, 2006. Version 1. Checksum: 7A122637AE72DF2B	FASTA	534	59,859
	10 20 30 40 50 60 MKRFAALYRT LDRSTGTLDK RAALVAYFRD APALDAAWAL YLLAGGKVAS ARMRIAGSGE 70 80 90 100 110 120 LREWITDTAG IADWLVADSY DHVGDLAETL ALLLDDPVTE AADLPLAEWI EQRLLPIANK 130 140 150 160 170 180 DVEVRKACIV QAWRSLAFDE RLVFNKLLTG ALRVGVSQRL VQQALAELSG MDTARIAQRM 190 200 210 220 230 240 LGSWRPHPTY LAELLTREEL PGDRQQPYPF FLASPLEAEV QTLGAIDDWL LEWKWDGIRL 250 260 270 280 290 300 QLIRRAGEAA LWSRGEERLD GRFPEIEHAA LQLPDGTVID GELLAWQPEQ SLPMPFTALQ 310 320 330 340 350 360 TRIQRLKPGP KTLTAAPARV VAYDLLELDG ADLRGRPLQE RRGLLEGVLT TLADPRIVAS 370 380 390 400 410 420 PLVQVSDWHA AAQVRVEARE RGVEGLMLKR AGSVYQSGRR RGDWWKWKID PLTIDAVLLY 430 440 450 460 470 480 AQAGHGRRST LYTDYTFGLW HEGQLVPIAK AYSGLDDSEI LQLDRWIRAN TTERFGPVRA 490 500 510 520 530 VTAHHVFELG VEAVNRSARH KSGIAVRFPR ILRWRQDKPM ADADHLSSLQ ALAR

References

[1]

"Genome sequence of Xanthomonas oryzae pv. oryzae suggests contribution of large numbers of effector genes and insertion sequences to its race diversity." Ochiai H., Inoue Y., Takeya M., Sasaki A., Kaku H. Jpn. Agric. Res. Q. 39:275-287(2005) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MAFF 311018.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008229 Genomic DNA. Translation: BAE68526.1.
RefSeq	YP_450800.1. NC_007705.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	342109.XOO_1771.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAE68526; BAE68526; BAE68526.
GeneID	3857397.
KEGG	xom:XOO_1771.
PATRIC	24113113. VBIXanOry49434_1986.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000260707.
KO	K01971.
OMA	AYDLLEW.
ProtClustDB	PRK09247.
Enzyme and pathway databases
BioCyc	XORY342109:GIX9-1797-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q2P4K1_XANOM

Accession

Primary (citable) accession number: Q2P4K1

Entry history

Integrated into UniProtKB/TrEMBL:	February 7, 2006
Last sequence update:	February 7, 2006
Last modified:	May 29, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)