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Protein
Submitted name:

Type III secretion apparatus

Gene

SG1282

Organism
Sodalis glossinidius (strain morsitans)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciSGLO343509:GJJC-1333-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Type III secretion apparatusImported
Gene namesi
Ordered Locus Names:SG1282Imported
OrganismiSodalis glossinidius (strain morsitans)Imported
Taxonomic identifieri343509 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSodalis
Proteomesi
  • UP000001932 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi343509.SG1282.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini179 – 26688Secretin_NInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiEOG6423BN.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2NTG8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKWNYNTIIL IMIFIISSVH AKTLPWRSAD FSLRARQMPL SQVLSNLAEN
60 70 80 90 100
YDTVVIIDPE VNSYFSGFIP SGPPLVILNK LMSQYHLVFY FDGDTLFIYP
110 120 130 140 150
ASRLKRQVIT LRTLRAAEFV RYLQNRHVPE SKSCEIRHIP DVNALDISGV
160 170 180 190 200
PACLERVSQL ATMLDGELTK RKGEAVSMNI YPLKYATAMD DRYQYRDQTV
210 220 230 240 250
LIPGIVSVLR DMNRGAGAAS PETTSPTQGL PMFSADPRQN AVIVRDYAAN
260 270 280 290 300
MAGYRQLIAA LDQRPQMIEI AVMIIDVDVG DINKLGIDWS GAMSLGGSGF
310 320 330 340 350
SFNSDGDIRG GFSSVISNTN DFMVRLNVLE QRAHAYILSQ PSVVTLNNIQ
360 370 380 390 400
AVLDKNVTFY TKLQGDKFAK LESVTTGSLL RVTPRLMEDQ GKQNIMLSLN
410 420 430 440 450
IQDGQQTSPL SATDPLPQVQ NSEIASQATL RPGQSLLLGG FQQDKQKQGQ
460 470 480 490
KKIPLLGDIP LLGHLFRSSI DETHSVMRLF LIKATVASSD PHHE
Length:494
Mass (Da):54,863
Last modified:February 7, 2006 - v1
Checksum:i6E2978DCCDDA066E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008232 Genomic DNA. Translation: BAE74557.1.
RefSeqiWP_011411111.1. NC_007712.1.

Genome annotation databases

EnsemblBacteriaiBAE74557; BAE74557; SG1282.
KEGGisgl:SG1282.
PATRICi23651320. VBISodGlo61428_2959.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008232 Genomic DNA. Translation: BAE74557.1.
RefSeqiWP_011411111.1. NC_007712.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi343509.SG1282.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAE74557; BAE74557; SG1282.
KEGGisgl:SG1282.
PATRICi23651320. VBISodGlo61428_2959.

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiEOG6423BN.

Enzyme and pathway databases

BioCyciSGLO343509:GJJC-1333-MONOMER.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Massive genome erosion and functional adaptations provide insights into the symbiotic lifestyle of Sodalis glossinidius in the tsetse host."
    Toh H., Weiss B.L., Perkin S.A.H., Yamashita A., Oshima K., Hattori M., Aksoy S.
    Genome Res. 16:149-156(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: morsitansImported.

Entry informationi

Entry nameiQ2NTG8_SODGM
AccessioniPrimary (citable) accession number: Q2NTG8
Entry historyi
Integrated into UniProtKB/TrEMBL: February 7, 2006
Last sequence update: February 7, 2006
Last modified: May 11, 2016
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.