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Reviewed, UniProtKB/Swiss-Prot Q2NIQ9 (PTH_AYWBP)

Last modified June 16, 2009. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Peptidyl-tRNA hydrolase
      Short name=PTH
    EC=3.1.1.29
Gene names
Name: pth
Ordered Locus Names: AYWB_567
OrganismAster yellows witches'-broom phytoplasma (strain AYWB) [Complete proteome] [HAMAP]
Taxonomic identifier322098 [NCBI]
Taxonomic lineageBacteriaTenericutesMollicutesAcholeplasmatalesAcholeplasmataceaeCandidatus PhytoplasmaCandidatus Phytoplasma asteris

Protein attributes

Sequence length188 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Function

The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis By similarity.

Catalytic activity

N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA. HAMAP MF_00083

Subunit structure

Monomer By similarity.

Subcellular location

Cytoplasm By similarity.

Sequence similarities

Belongs to the PTH family.

Ontologies

Keywords
   Cellular componentCytoplasm
   Molecular functionHydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processtranslation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionaminoacyl-tRNA hydrolase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 188188Peptidyl-tRNA hydrolase HAMAP MF_00083
PRO_0000264005

Sequences

Sequence LengthMass (Da)Tools
Q2NIQ9-1 [UniParc].

Last modified February 7, 2006. Version 1.
Checksum: F0A58283765BEAB9

FASTA18821,573
        10         20         30         40         50         60 
MKLIVGLGNP GKKFLNTRHN IGFVVVDSFL SQNKYQTLKE DTNAHIYQIN FNNHQTLLIK 

        70         80         90        100        110        120 
PQTYMNLSGE VVKKIINKYR IKIENILVIV DDIYLDEGKL KLKMQGGHGG HNGLRNIIDR 

       130        140        150        160        170        180 
LCTKQFKRLK IGVSLDSCMP LDQYLLTPVN ASSQKNILKN IDIINKIIFN FIQDVDFNIL 


MNGYNSKH 

« Hide

References

[1]"Living with genome instability: the adaptation of phytoplasmas to diverse environments of their insect and plant hosts."
Bai X., Zhang J., Ewing A., Miller S.A., Jancso Radek A., Shevchenko D.V., Tsukerman K., Walunas T., Lapidus A., Campbell J.W., Hogenhout S.A.
J. Bacteriol. 188:3682-3696(2006) [PubMed: 16672622] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

CP000061 Genomic DNA. Translation: ABC65684.1.
RefSeqYP_456763.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID3866060.
GenomeReviewsGene locus AYWB_567 in contig CP000061_GR.
KEGGayw:AYWB_567.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ2NIQ9.
OMAQ2NIQ9. KIPLDNI.

Family and domain databases

HAMAPMF_00083.
[Tree]
InterProIPR001328. Pept_tRNA_hydro.
IPR018171. Pept_tRNA_hydro_CS.
[Graphical view]
Gene3DG3DSA:3.40.50.1470. Pept_tRNA_hydro. 1 hit.
PANTHERPTHR17224. Pept_tRNA_hydro. 1 hit.
PfamPF01195. Pept_tRNA_hydro. 1 hit.
[Graphical view]
ProDomPD005324. PeptRNAhydrolase. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsTIGR00447. pth. 1 hit.
PROSITEPS01195. PEPT_TRNA_HYDROL_1. 1 hit.
PS01196. PEPT_TRNA_HYDROL_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry namePTH_AYWBP
AccessionPrimary (citable) accession number: Q2NIQ9
Entry history
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: February 7, 2006
Last modified: June 16, 2009
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents