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Protein
Submitted name:

Predicted glycosyltransferase

Gene

Msp_0541

Organism
Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

TransferaseImported

Enzyme and pathway databases

BioCyciMSTA339860:GJEZ-541-MONOMER.

Protein family/group databases

CAZyiGT2. Glycosyltransferase Family 2.

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted glycosyltransferaseImported
Gene namesi
Ordered Locus Names:Msp_0541Imported
OrganismiMethanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3)Imported
Taxonomic identifieri339860 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanobacteriaMethanobacterialesMethanobacteriaceaeMethanosphaera
Proteomesi
  • UP000001931 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi339860.Msp_0541.

Structurei

3D structure databases

ProteinModelPortaliQ2NGW3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini15 – 168154Glyco_trans_2-likeInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiarCOG00895. Archaea.
COG0463. LUCA.
HOGENOMiHOG000283250.
OMAiKMVTDSQ.

Family and domain databases

Gene3Di3.90.550.10. 1 hit.
InterProiIPR001173. Glyco_trans_2-like.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view]
PfamiPF00535. Glycos_transf_2. 1 hit.
[Graphical view]
SUPFAMiSSF53448. SSF53448. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2NGW3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKEDIPPIT SSIYIVLSCY NEEETLEEVT TELVKRGFKV LIIDDGSVDS
60 70 80 90 100
SPEIAKKLVD KFSPMVYLYR HTINVGLGGA IKTGIKAALS KNADIIITFD
110 120 130 140 150
ADGQHNPDDL YNMYPPLQDG SADVVIASRD FNDMPKGRRF GNTVMNYITY
160 170 180 190 200
IFQGKMVTDS QSGLRAFTNE AARKLNLKSP QYGVSSEIIG EIKRRNLRLK
210 220 230
EVPMTTIYDK RTIEKGTNTI VGLKIILEFL NETFK
Length:235
Mass (Da):26,370
Last modified:February 7, 2006 - v1
Checksum:iEF88E2BD145354F6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000102 Genomic DNA. Translation: ABC56940.1.
RefSeqiWP_011406140.1. NC_007681.1.

Genome annotation databases

EnsemblBacteriaiABC56940; ABC56940; Msp_0541.
GeneIDi3856208.
KEGGimst:Msp_0541.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000102 Genomic DNA. Translation: ABC56940.1.
RefSeqiWP_011406140.1. NC_007681.1.

3D structure databases

ProteinModelPortaliQ2NGW3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi339860.Msp_0541.

Protein family/group databases

CAZyiGT2. Glycosyltransferase Family 2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABC56940; ABC56940; Msp_0541.
GeneIDi3856208.
KEGGimst:Msp_0541.

Phylogenomic databases

eggNOGiarCOG00895. Archaea.
COG0463. LUCA.
HOGENOMiHOG000283250.
OMAiKMVTDSQ.

Enzyme and pathway databases

BioCyciMSTA339860:GJEZ-541-MONOMER.

Family and domain databases

Gene3Di3.90.550.10. 1 hit.
InterProiIPR001173. Glyco_trans_2-like.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view]
PfamiPF00535. Glycos_transf_2. 1 hit.
[Graphical view]
SUPFAMiSSF53448. SSF53448. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Methanosphaera stadtmanae reveals why this human intestinal archaeon is restricted to methanol and H2 for methane formation and ATP synthesis."
    Fricke W.F., Seedorf H., Henne A., Kruer M., Liesegang H., Hedderich R., Gottschalk G., Thauer R.K.
    J. Bacteriol. 188:642-658(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3Imported.

Entry informationi

Entry nameiQ2NGW3_METST
AccessioniPrimary (citable) accession number: Q2NGW3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 7, 2006
Last sequence update: February 7, 2006
Last modified: April 13, 2016
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.