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Protein

30S ribosomal protein S4e

Gene

rps4e

Organism
Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S4eUniRule annotation
Gene namesi
Name:rps4eUniRule annotation
Ordered Locus Names:Msp_0896
OrganismiMethanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3)
Taxonomic identifieri339860 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanobacteriaMethanobacterialesMethanobacteriaceaeMethanosphaera
Proteomesi
  • UP000001931 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000813431 – 24130S ribosomal protein S4eAdd BLAST241

Interactioni

Protein-protein interaction databases

STRINGi339860.Msp_0896

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini43 – 105S4 RNA-bindingUniRule annotationAdd BLAST63

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eS4 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04093 Archaea
COG1471 LUCA
HOGENOMiHOG000231324
KOiK02987
OMAiRKDYKFP
OrthoDBiPOG093Z0C23

Family and domain databases

CDDicd00165 S4, 1 hit
Gene3Di2.30.30.30, 1 hit
2.40.50.740, 1 hit
HAMAPiMF_00485 Ribosomal_S4e, 1 hit
InterProiView protein in InterPro
IPR014722 Rib_L2_dom2
IPR000876 Ribosomal_S4e
IPR013845 Ribosomal_S4e_central_region
IPR038237 Ribosomal_S4e_central_sf
IPR013843 Ribosomal_S4e_N
IPR018199 Ribosomal_S4e_N_CS
IPR002942 S4_RNA-bd
PANTHERiPTHR11581 PTHR11581, 1 hit
PfamiView protein in Pfam
PF00900 Ribosomal_S4e, 1 hit
PF08071 RS4NT, 1 hit
PIRSFiPIRSF002116 Ribosomal_S4, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002667 Ribosomal_S4e_central, 1 hit
PROSITEiView protein in PROSITE
PS00528 RIBOSOMAL_S4E, 1 hit
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

Q2NFW9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MANMGSRKHL KRFKAPKMWP IHKKEEVWTT KTSAGPHALE ESIPLVMVLR
60 70 80 90 100
DILGLAANSR EAKIILNNSD VLVDGIPRKN HRFPVGFMDV ISIPKINKTF
110 120 130 140 150
RVLQDYKGRL VLKEIEEKDS TFKLVKILGK TTIKGGKTQL NLEGGRNIIA
160 170 180 190 200
DDDYKTGDVL LLNIPEQKIS DSIKFEEGAL GLITGGKHIS EVGKIDEIKI
210 220 230 240
TQSSKSNTVL METEEGSFLT LARYVFVVGQ DKPVISLVGD N
Length:241
Mass (Da):26,805
Last modified:February 7, 2006 - v1
Checksum:iAA3895461A327F97
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000102 Genomic DNA Translation: ABC57284.1
RefSeqiWP_011406483.1, NC_007681.1

Genome annotation databases

EnsemblBacteriaiABC57284; ABC57284; Msp_0896
GeneIDi3855461
KEGGimst:Msp_0896

Similar proteinsi

Entry informationi

Entry nameiRS4E_METST
AccessioniPrimary (citable) accession number: Q2NFW9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: February 7, 2006
Last modified: March 28, 2018
This is version 77 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

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