Q2NFM0 (Q2NFM0_METST) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribose-5-phosphate isomerase A HAMAP MF_00170
EC=5.3.1.6 HAMAP MF_00170

Alternative name(s):
Phosphoriboisomerase A HAMAP MF_00170

Gene names

Name:	rpiA HAMAP MF_00170 EMBL ABC57383.1
Ordered Locus Names:	Msp_0995

Organism

Methanosphaera stadtmanae (strain DSM 3091) [Complete proteome] [HAMAP]

Taxonomic identifier

339860 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanobacteria › Methanobacteriales › Methanobacteriaceae › Methanosphaera

Protein attributes

Sequence length	231 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family. HAMAP MF_00170

Ontologies

Keywords
Molecular function	Isomerase HAMAP MF_00170 EMBL ABC57383.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: HAMAP
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2NFM0 [UniParc]. Last modified February 7, 2006. Version 1. Checksum: D0493493449598F3	FASTA	231	25,216
	10 20 30 40 50 60 MVNMDILKDN VGKKAADLIK DGQIVGLGTG STTHYFIRYL GERIKNEELN ILGIPTSYQS 70 80 90 100 110 120 LIKAREAGIN TTTLDEYDID IAVDGADEVN PTLDLIKGGG AAHTLEKLVD SSAKKFVVIV 130 140 150 160 170 180 DESKVVEELG KFPVPLEIIP EALRVVKDTL VDLGGKPELR MGIQKDGPVI TDNGNFILDT 190 200 210 220 230 KFDKIRNPHK LEKELNIIPG VLENGIFAGL ADKVIIGKMS AIEEIDREDI L

References

[1]

"The genome sequence of Methanosphaera stadtmanae reveals why this human intestinal archaeon is restricted to methanol and H2 for methane formation and ATP synthesis." Fricke W.F., Seedorf H., Henne A., Kruer M., Liesegang H., Hedderich R., Gottschalk G., Thauer R.K. J. Bacteriol. 188:642-658(2006) [PubMed: 16385054] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000102 Genomic DNA. Translation: ABC57383.1.
RefSeq	YP_448026.1. NC_007681.1.
3D structure databases
ProteinModelPortal	Q2NFM0.
SMR	Q2NFM0. Positions 5-227.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2NFM0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3855276.
GenomeReviews	Gene locus Msp_0995 in contig CP000102_GR.
KEGG	mst:Msp_0995.
NMPDR	fig|339860.6.peg.954.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG07879.
HOGENOM	HBG515603.
OMA	GGDPEYR.
PhylomeDB	Q2NFM0.
ProtClustDB	PRK00702.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. IPR014036. Tscrpt_reg_HTH_DeoR. [Graphical view]
KO	K01807.
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF00455. DeoR. 1 hit. PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. RpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2NFM0_METST

Accession

Primary (citable) accession number: Q2NFM0

Entry history

Integrated into UniProtKB/TrEMBL:	February 7, 2006
Last sequence update:	February 7, 2006
Last modified:	November 16, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)