Q2NE43 (Q2NE43_METST) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL ABC57910.1

Gene names

Ordered Locus Names:

Msp_1543

Organism

Methanosphaera stadtmanae (strain DSM 3091) [Complete proteome] [HAMAP]

Taxonomic identifier

339860 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanobacteria › Methanobacteriales › Methanobacteriaceae › Methanosphaera

Protein attributes

Sequence length	119 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	DNA-directed RNA polymerase activity Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2NE43 [UniParc]. Last modified February 7, 2006. Version 1. Checksum: 7697F168F09188A2	FASTA	119	13,819
	10 20 30 40 50 60 MIGKKVIDTK PITISEAKEI LMKKVEEKVD ENNEIDGHQF TYEQNLTIDY VNKFALLDAD 70 80 90 100 110 DAKELRTKLE EYLTPVQAVK VVDLMPEDLD DLRLIFAKER GTFETDALKN ILDLLDQYR

References

[1]

"The genome sequence of Methanosphaera stadtmanae reveals why this human intestinal archaeon is restricted to methanol and H2 for methane formation and ATP synthesis." Fricke W.F., Seedorf H., Henne A., Kruer M., Liesegang H., Hedderich R., Gottschalk G., Thauer R.K. J. Bacteriol. 188:642-658(2006) [PubMed: 16385054] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000102 Genomic DNA. Translation: ABC57910.1.
RefSeq	YP_448553.1. NC_007681.1.
3D structure databases
ProteinModelPortal	Q2NE43.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2NE43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3854848.
GenomeReviews	Gene locus Msp_1543 in contig CP000102_GR.
KEGG	mst:Msp_1543.
NMPDR	fig|339860.6.peg.1476.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG11473.
HOGENOM	HBG321515.
OMA	CALDYLQ.
Family and domain databases
InterPro	IPR010997. HRDC-like. IPR015906. HRDC-like_sub1. IPR015907. HRDC-like_sub2. IPR010924. RNA_pol_F_arc. IPR005574. RNA_pol_II_Rpb4. [Graphical view]
Gene3D	G3DSA:1.10.150.80. HRDC-like_sub1. 1 hit. G3DSA:1.10.287.420. HRDC-like_sub2. 1 hit.
KO	K03051.
Pfam	PF03874. RNA_pol_Rpb4. 1 hit. [Graphical view]
PIRSF	PIRSF005053. RNA_pol_F_arch. 1 hit.
SUPFAM	SSF47819. HRDC_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2NE43_METST

Accession

Primary (citable) accession number: Q2NE43

Entry history

Integrated into UniProtKB/TrEMBL:	February 7, 2006
Last sequence update:	February 7, 2006
Last modified:	November 16, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)