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Q2NBM4

- Q2NBM4_ERYLH

UniProt

Q2NBM4 - Q2NBM4_ERYLH

Protein
Submitted name:

Uncharacterized protein

Gene

ELI_04125

Organism
Erythrobacter litoralis (strain HTCC2594)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 55 (01 Oct 2014)
      Sequence version 1 (07 Feb 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Enzyme and pathway databases

    BioCyciELIT314225:GHLE-846-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Ordered Locus Names:ELI_04125Imported
    OrganismiErythrobacter litoralis (strain HTCC2594)Imported
    Taxonomic identifieri314225 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesErythrobacteraceaeErythrobacter
    ProteomesiUP000008808: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi314225.ELI_04125.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiHVLAAIC.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q2NBM4-1 [UniParc]FASTAAdd to Basket

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    MARRNDPLAI YNSKRDFAKT PEPSGKAESS AGGDLFIVQK HDATRLHWDL    50
    RLEVDGVLKS WAVTKGPSPD PDIKRLAVRT EDHPVSYAEF EGTIPKGEYG 100
    GGTVMLWDRG SWAPIEGKSA KDLEKGHLHF ILQGGRMQGE WLLIRLKKKP 150
    GEKRENWLLR KLQDEHAEEG DVLVERELTS VLTGRSMAEI AADKKGEYPL 200
    AGKKDEAFLA QMEKASARNE AKAKQRKRRK AAPLPKFRQP QLATLVDDVP 250
    AGNGWMHEIK FDGYRALVAA KGNDVRVFTR SGKDWTEKFG PLVGAIAALD 300
    LPASLIDGEI VASDADGNPD FSKLQQVLKR GHGSQSKADR LAFHAFDLVE 350
    LDGEDLAKLP NIERKERLEA MLATAEPPIH VADHVIGAGE KLYEAMCAAG 400
    QEGIISKKID APYRHSRSKG WVKVKCTRRQ EFVIVGWKAS RAKGRPFASL 450
    LMAQNEDGEL VYKGNVGTGF TADELDMLAG KLKRLERKTP PVAVDAASAR 500
    QVTWVAPKLV AEIAFAEFTA DGKIRHGSYL GLRSDKDADD VKPEKAAPAP 550
    KTAANVKISS RDRVVFPDSG QTKGELADYY EAVAGIMLPF AARRPVSLVR 600
    CPQGRAKKCF FQKHDSGAFG DAVHHVPIME KDGGTKGYLY VEDARGILQC 650
    VQMGTIEFHG WASRTDDVEL PDRMIFDLDP DEGLDFGDVK QAARDIKARL 700
    SDIGLVSFAM LSGGKGVHVV VPLAPGHSWD AHKDFARRFA EALSLAEPQR 750
    FTATMSKAKR KGKIFIDWLR NQRGSTAVLP YSARARRGAP VAVPIGWNEL 800
    KDMQNAKSFS INDANRLLTR AGSKTLAGWG FADQELPDH 839
    Length:839
    Mass (Da):92,345
    Last modified:February 7, 2006 - v1
    Checksum:iF25942D608220F28
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000157 Genomic DNA. Translation: ABC62917.1.
    RefSeqiYP_457714.1. NC_007722.1.

    Genome annotation databases

    EnsemblBacteriaiABC62917; ABC62917; ELI_04125.
    GeneIDi3870766.
    KEGGieli:ELI_04125.
    PATRICi21858774. VBIEryLit102657_0822.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000157 Genomic DNA. Translation: ABC62917.1 .
    RefSeqi YP_457714.1. NC_007722.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 314225.ELI_04125.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABC62917 ; ABC62917 ; ELI_04125 .
    GeneIDi 3870766.
    KEGGi eli:ELI_04125.
    PATRICi 21858774. VBIEryLit102657_0822.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi HVLAAIC.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci ELIT314225:GHLE-846-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Erythrobacter litoralis HTCC2594."
      Oh H.M., Giovannoni S.J., Ferriera S., Johnson J., Cho J.C.
      J. Bacteriol. 191:2419-2420(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HTCC2594Imported.

    Entry informationi

    Entry nameiQ2NBM4_ERYLH
    AccessioniPrimary (citable) accession number: Q2NBM4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 7, 2006
    Last sequence update: February 7, 2006
    Last modified: October 1, 2014
    This is version 55 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3