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Q2NBM4 (Q2NBM4_ERYLH) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:ELI_04125 EMBL ABC62917.1
OrganismErythrobacter litoralis (strain HTCC2594) [Complete proteome] [HAMAP] EMBL ABC62917.1
Taxonomic identifier314225 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesErythrobacteraceaeErythrobacter

Protein attributes

Sequence length839 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q2NBM4 [UniParc].

Last modified February 7, 2006. Version 1.
Checksum: F25942D608220F28

FASTA83992,345
        10         20         30         40         50         60 
MARRNDPLAI YNSKRDFAKT PEPSGKAESS AGGDLFIVQK HDATRLHWDL RLEVDGVLKS 

        70         80         90        100        110        120 
WAVTKGPSPD PDIKRLAVRT EDHPVSYAEF EGTIPKGEYG GGTVMLWDRG SWAPIEGKSA 

       130        140        150        160        170        180 
KDLEKGHLHF ILQGGRMQGE WLLIRLKKKP GEKRENWLLR KLQDEHAEEG DVLVERELTS 

       190        200        210        220        230        240 
VLTGRSMAEI AADKKGEYPL AGKKDEAFLA QMEKASARNE AKAKQRKRRK AAPLPKFRQP 

       250        260        270        280        290        300 
QLATLVDDVP AGNGWMHEIK FDGYRALVAA KGNDVRVFTR SGKDWTEKFG PLVGAIAALD 

       310        320        330        340        350        360 
LPASLIDGEI VASDADGNPD FSKLQQVLKR GHGSQSKADR LAFHAFDLVE LDGEDLAKLP 

       370        380        390        400        410        420 
NIERKERLEA MLATAEPPIH VADHVIGAGE KLYEAMCAAG QEGIISKKID APYRHSRSKG 

       430        440        450        460        470        480 
WVKVKCTRRQ EFVIVGWKAS RAKGRPFASL LMAQNEDGEL VYKGNVGTGF TADELDMLAG 

       490        500        510        520        530        540 
KLKRLERKTP PVAVDAASAR QVTWVAPKLV AEIAFAEFTA DGKIRHGSYL GLRSDKDADD 

       550        560        570        580        590        600 
VKPEKAAPAP KTAANVKISS RDRVVFPDSG QTKGELADYY EAVAGIMLPF AARRPVSLVR 

       610        620        630        640        650        660 
CPQGRAKKCF FQKHDSGAFG DAVHHVPIME KDGGTKGYLY VEDARGILQC VQMGTIEFHG 

       670        680        690        700        710        720 
WASRTDDVEL PDRMIFDLDP DEGLDFGDVK QAARDIKARL SDIGLVSFAM LSGGKGVHVV 

       730        740        750        760        770        780 
VPLAPGHSWD AHKDFARRFA EALSLAEPQR FTATMSKAKR KGKIFIDWLR NQRGSTAVLP 

       790        800        810        820        830 
YSARARRGAP VAVPIGWNEL KDMQNAKSFS INDANRLLTR AGSKTLAGWG FADQELPDH 

« Hide

References

[1]"Complete genome sequence of Erythrobacter litoralis HTCC2594."
Oh H.M., Giovannoni S.J., Ferriera S., Johnson J., Cho J.C.
J. Bacteriol. 191:2419-2420(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HTCC2594.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000157 Genomic DNA. Translation: ABC62917.1.
RefSeqYP_457714.1. NC_007722.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING314225.ELI_04125.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABC62917; ABC62917; ELI_04125.
GeneID3870766.
KEGGeli:ELI_04125.
PATRIC21858774. VBIEryLit102657_0822.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMAHVLAAIC.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycELIT314225:GHLE-846-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2NBM4_ERYLH
AccessionPrimary (citable) accession number: Q2NBM4
Entry history
Integrated into UniProtKB/TrEMBL: February 7, 2006
Last sequence update: February 7, 2006
Last modified: May 14, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)