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Protein
Submitted name:

DNA ligase, ATP-dependent, putative

Gene

ELI_13165

Organism
Erythrobacter litoralis (strain HTCC2594)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciELIT314225:GHLE-2678-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase, ATP-dependent, putativeImported
Gene namesi
Ordered Locus Names:ELI_13165Imported
OrganismiErythrobacter litoralis (strain HTCC2594)Imported
Taxonomic identifieri314225 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesErythrobacteraceaeErythrobacter
ProteomesiUP000008808 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi314225.ELI_13165.

Structurei

3D structure databases

ProteinModelPortaliQ2N6G6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK10747.
OMAiGQPYPFF.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2N6G6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQAFADLIDA LVYTRSRNEK LRLIAAYLRE TPDPDRGWAL AALTDGLDFP
60 70 80 90 100
AVKSSAIRTI MKERIDPVLW TLSRDFVGDT AETASLLWPA PDSDVTPPPS
110 120 130 140 150
VSEVVDLLSK MTRQSVLTEL PALLDRLDPS GRYALLKIAT GAMRIGVSSR
160 170 180 190 200
LAKVAFAQAF GVDVEDVEEY WHGLEPPYEE LFAWAADGAD PPDTENKPTF
210 220 230 240 250
RPFMLAHPLE DTVVDMADYA AEWKWDGIRV QLVHAGGETR IYSRSGDDIS
260 270 280 290 300
RTFPEMVDAL QVPAVLDGEL LVRGDAQGGE AGGAASFNAL QQRLGRKTVS
310 320 330 340 350
KKMLSESPAF VRLYDALIIE GEDLRDQPWE RRRDHLERFV PRLPDSHFDL
360 370 380 390 400
STIVDARDFE HLAEIREGTR EDAIEGLMLK RRDSPYIAGR KTGLWYKWKR
410 420 430 440 450
DPLLVDCVLM YAQRGSGKRS SFYSDYTFGC WDGDPDKGAE LLPVGKAYSG
460 470 480 490 500
FTDEELKKLD RLVRQNTLNR FGPVREVERT LVFEVAFDSV HTSKRHKSGL
510 520 530
AMRFPRIHRI RWDKPVHEAD RLQTLKAMIQ D
Length:531
Mass (Da):59,993
Last modified:February 7, 2006 - v1
Checksum:i348ECB50C43DC3A0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000157 Genomic DNA. Translation: ABC64725.1.
RefSeqiYP_459522.1. NC_007722.1.

Genome annotation databases

EnsemblBacteriaiABC64725; ABC64725; ELI_13165.
KEGGieli:ELI_13165.
PATRICi21862429. VBIEryLit102657_2627.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000157 Genomic DNA. Translation: ABC64725.1.
RefSeqiYP_459522.1. NC_007722.1.

3D structure databases

ProteinModelPortaliQ2N6G6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi314225.ELI_13165.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABC64725; ABC64725; ELI_13165.
KEGGieli:ELI_13165.
PATRICi21862429. VBIEryLit102657_2627.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK10747.
OMAiGQPYPFF.
OrthoDBiEOG6Q8HXT.

Enzyme and pathway databases

BioCyciELIT314225:GHLE-2678-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Erythrobacter litoralis HTCC2594."
    Oh H.M., Giovannoni S.J., Ferriera S., Johnson J., Cho J.C.
    J. Bacteriol. 191:2419-2420(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HTCC2594Imported.

Entry informationi

Entry nameiQ2N6G6_ERYLH
AccessioniPrimary (citable) accession number: Q2N6G6
Entry historyi
Integrated into UniProtKB/TrEMBL: February 7, 2006
Last sequence update: February 7, 2006
Last modified: April 1, 2015
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.