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Q2MGU6 (Q2MGU6_HHV1) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Single-stranded DNA-binding protein EMBL ADD60076.1

UL29 EMBL AER37613.1
Gene names
Name:UL29 EMBL BAE78520.1
OrganismHuman herpesvirus 1 (HHV-1) (Human herpes simplex virus 1) EMBL BAE78520.1
Taxonomic identifier10298 [NCBI]
Taxonomic lineageVirusesdsDNA viruses, no RNA stageHerpesviralesHerpesviridaeAlphaherpesvirinaeSimplexvirus
Virus hostHomo sapiens (Human) [TaxID: 9606]

Protein attributes

Sequence length1196 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   LigandDNA-binding EMBL ADD60076.1
Gene Ontology (GO)
   Biological_processDNA replication

Inferred from electronic annotation. Source: InterPro

   Cellular_componenthost cell nucleus

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsingle-stranded DNA binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q2MGU6 [UniParc].

Last modified February 21, 2006. Version 1.
Checksum: 3A0EE0B53108894B

FASTA1,196128,288
        10         20         30         40         50         60 
METKPKTATT IKVPPGPLGY VYARACPSEG IELLALLSAR SGDADVAVAP LVVGLTVESG 

        70         80         90        100        110        120 
FEANVAVVVG SRTTGLGGTA VSLKLTPSHY SSSVYVFHGG RHLDPSTQAP NLTRLCERAR 

       130        140        150        160        170        180 
RHFGFSDYTP RPGDLKHETT GEALCERLGL DPDRALLYLV VTEGFKEAVC INNTFLHLGG 

       190        200        210        220        230        240 
SDKVTIGGAE VHRIPVYPLQ LFMPDFSRVI AEPFNANHRS IGENFTYPLP FFNRPLNRLL 

       250        260        270        280        290        300 
FEAVVGPAAV ALRCRNVDAV ARAAAHLAFD ENHEGAALPA DITFTAFEAS QGKTPRGGRD 

       310        320        330        340        350        360 
GGGKGPAGGF EQRLASVMAG DAALALESIV SMAVFDEPPT DISAWPLCEG QDTAAARANA 

       370        380        390        400        410        420 
VGAYLARAAG LVGAMVFSTN SALHLTEVDD AGPADPKDHS KPSFYRFFLV PGTHVAANPQ 

       430        440        450        460        470        480 
VDREGHVVPG FEGRPTAPLV GGTQEFAGEH LAMLCGFSPA LLAKMLFYLE RCDGGVIVGR 

       490        500        510        520        530        540 
QEMDVFRYVA DSNQTDVPCN LCTFDTRHAC VHTTLMRLRA RHPKFASAAR GAIGVFGTMN 

       550        560        570        580        590        600 
SMYSDCDVLG NYAAFSALKR ADGSETARTI MQETYRAATE RVMAELETLQ YVDQAVPTAM 

       610        620        630        640        650        660 
GRLETIITNR EALHTVVNNV RQVVDREVEQ LMRNLVEGRN FKFRDGLGEA NHAMSLTLDP 

       670        680        690        700        710        720 
YACGPCPLLQ LLGRRSNLAV YQDLALSQCH GVFAGQSVEG RNFRNQFQPV LRRRVMDMFN 

       730        740        750        760        770        780 
NGFLSAKTLT VALSEGAAIC APSLTAGQTA PAESSFEGDV ARVTLGFPKE LRVKSRVLFA 

       790        800        810        820        830        840 
GASANASEAA KARVASLQSA YQKPDKRVDI LLGPLGFLLK QFHAAIFPNG KPPGSNQPNP 

       850        860        870        880        890        900 
QWFWTALQRN QLPARLLSRE DIETIAFIKK FSLDYGAINF INLAPNNVSE LAMYYMANQI 

       910        920        930        940        950        960 
LRYCDHSTYF INTLTAIIAG SRRPPSVQAA AAWSAQGGAG LEAGARALMD AVDAHPGAWT 

       970        980        990       1000       1010       1020 
SMFASCNLLR PVMAARPMVV LGLSISKYYG MAGNDRVFQA GNWASLMGGK NACPLLIFDR 

      1030       1040       1050       1060       1070       1080 
TRKFVLACPR AGFVCAASSL GGGAHESSLC EQLRGIISEG GAAVASSVFV ATVKSLGPRT 

      1090       1100       1110       1120       1130       1140 
QQLQIEDWLA LLEDEYLSEE MMELTARALE RGNGEWSTDA ALEVAHEAEA LVSQLGNAGE 

      1150       1160       1170       1180       1190 
VFNFGDFGCE DDNATPFGGP GAPGPAFAGR KRAFHGDDPF GEGPPDKKGD LTLDML 

« Hide

References

[1]"Analysis of genetic stability of essential genes in clinically isolated Herpes Simplex Virus 1."
Suzuki M., Kobayashi N., Takahashi K., Honda R., Hirooka J., Okuda T., Yoshida Y., Hama Y., Kawana T., Shiraki K.
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BBY-V-1801 EMBL BAE78520.1, KBS-C-1783 EMBL BAE78518.1, KBS-V-1782 EMBL BAE78517.1 and YMS-1732 EMBL BAE78516.1.
[2]"Sequence variability in clinical and laboratory isolates of herpes simplex virus 1 reveals new mutations."
Szpara M.L., Parsons L., Enquist L.W.
J. Virol. 84:5303-5313(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: H129 EMBL ADD60076.1.
[3]"Evolution of sexually transmitted and sexually transmissible human herpesviruses."
Davison A.J.
Ann. N. Y. Acad. Sci. 1230:E37-E49(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: R62 EMBL ADM23794.1, S23 EMBL ADM23568.1 and S25 EMBL ADM23643.1.
[4]"Multiplex sequencing of seven ocular herpes simplex virus type-1 genomes: phylogeny, sequence variability, and SNP distribution."
Kolb A.W., Adams M., Cabot E.L., Craven M., Brandt C.R.
Invest. Ophthalmol. Vis. Sci. 52:9061-9073(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 134 EMBL AER37613.1, CJ311 EMBL AER37753.1 and CJ970 EMBL AER37967.1.
[5]Davison A.J.
Submitted (OCT-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: R62 EMBL ADM23794.1, S23 EMBL ADM23568.1 and S25 EMBL ADM23643.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GU734772 Genomic DNA. Translation: ADD60076.1.
HM585512 Genomic DNA. Translation: ADM23568.1.
HM585513 Genomic DNA. Translation: ADM23643.1.
HM585515 Genomic DNA. Translation: ADM23794.1.
JN400093 Genomic DNA. Translation: AER37613.1.
JN420338 Genomic DNA. Translation: AER37753.1.
JN420341 Genomic DNA. Translation: AER37967.1.
AB247574 Genomic DNA. Translation: BAE78516.1.
AB247575 Genomic DNA. Translation: BAE78517.1.
AB247576 Genomic DNA. Translation: BAE78518.1.
AB247578 Genomic DNA. Translation: BAE78520.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR000635. Viral_ssDNA-bd.
[Graphical view]
PfamPF00747. Viral_DNA_bp. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2MGU6_HHV1
AccessionPrimary (citable) accession number: Q2MGU6
Entry history
Integrated into UniProtKB/TrEMBL: February 21, 2006
Last sequence update: February 21, 2006
Last modified: January 22, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)