Unreviewed,
UniProtKB/TrEMBL Q2MGT9 (Q2MGT9_RANTA)
Last modified
November 3, 2009.
Version 17.
History...
Clusters with 100%,
90%,
50% identity |
Third-party data |
Customize display | text xml rdf/xml gff fasta |
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Submitted name: Sex determining region Y EMBL BAE78533.1 | ||
| Gene names |
| ||
| Organism | Rangifer tarandus (Reindeer) (Caribou) EMBL BAE78533.1 | ||
| Taxonomic identifier | 9870 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Cetartiodactyla › Ruminantia › Pecora › Cervidae › Odocoileinae › Rangifer |
Protein attributes
| Sequence length | 229 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Predicted. |
General annotation (Comments)
| Sequence similarities | Contains 1 HMG box DNA-binding domain. Spearmint SPM000910 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Differentiation Sexual differentiation Spearmint SPM000910 Transcription Transcription regulation Spearmint SPM000910 |
| Cellular component | Nucleus Spearmint SPM000910 |
| Ligand | DNA-binding Spearmint SPM000910 |
| Molecular function | Activator Spearmint SPM000910 |
| Gene Ontology (GO) | |
| Biological process | cell differentiation Inferred from electronic annotation. Source: UniProtKB-KW male sex determinationInferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependentInferred from electronic annotation. Source: UniProtKB-KW transcriptionInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | nucleus Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | protein binding Inferred from electronic annotation. Source: InterPro transcription factor activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
| ||||||||||||||||||
References
| [1] | "Sry gene in Cervidae." Wada K., Nishibori M., Yokohama M. Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Liver EMBL BAE78533.1. |
Cross-references
Sequence databases | |
|---|---|
| AB247629 Genomic DNA. Translation: BAE78533.1. | |
3D structure databases | |
| SMR | Q2MGT9. Positions 51-130. |
| ModBase | Search... |
Phylogenomic databases | |
| HOVERGEN | Q2MGT9. |
Family and domain databases | |
| InterPro | IPR000910. HMG_HMG1/HMG2. IPR009071. HMG_superfamily. IPR017253. Sex-determining_region_Y. [Graphical view] |
| Gene3D | G3DSA:1.10.30.10. HMG-box. 1 hit. |
| Pfam | PF00505. HMG_box. 1 hit. [Graphical view] |
| PIRSF | PIRSF037653. SRY. 1 hit. |
| SMART | SM00398. HMG. 1 hit. [Graphical view] |
| PROSITE | PS50118. HMG_BOX_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q2MGT9_RANTA | ||||||||
| Accession | Primary (citable) accession number: Q2MGT9 | ||||||||
| Entry history |
| ||||||||
| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with


