Unreviewed, UniProtKB/TrEMBL Q2M2U7 (Q2M2U7_HUMAN)

Names and origin

Protein names

Submitted name:
    Transient receptor potential 4 EMBL AAI05642.1

Gene names

Name:

TRPC4 EMBL AAI05642.1

Organism

Homo sapiens (Human) EMBL AAI05642.1

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length	977 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

Ontologies

Keywords
Biological process	Ion transport Transport
Cellular component	Membrane
Domain	ANK repeat RuleBase RU003321V2 Spearmint SPM005821 Repeat RuleBase RU003536V1 Spearmint SPM005821 Transmembrane RuleBase RU003378V0
Molecular function	Ionic channel RuleBase RU003378V0 Receptor
Gene Ontology (GO)
Biological process	regulation of calcium ion transport Inferred from electronic annotation. Source: Compara
Cellular component	cytoplasm Inferred from electronic annotation. Source: Compara integral to plasma membrane Inferred from electronic annotation. Source: Compara
Molecular function	calcium channel activity Inferred from electronic annotation. Source: InterPro receptor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2M2U7-1 [UniParc]. Last modified February 21, 2006. Version 1. Checksum: 77E4D27C2121B60E	FASTA	977	112,087
	10 20 30 40 50 60 MAQFYYKRNV NAPYRDRIPL RIVRAESELS PSEKAYLNAV EKGDYASVKK SLEEAEIYFK 70 80 90 100 110 120 ININCIDPLG RTALLIAIEN ENLELIELLL SFNVYVGDAL LHAIRKEVVG AVELLLNHKK 130 140 150 160 170 180 PSGEKQVPPI LLDKQFSEFT PDITPIILAA HTNNYEIIKL LVQKGVSVPR PHEVRCNCVE 190 200 210 220 230 240 CVSSSDVDSL RHSRSRLNIY KALASPSLIA LSSEDPFLTA FQLSWELQEL SKVENEFKSE 250 260 270 280 290 300 YEELSRQCKQ FAKDLLDQTR SSRELEIILN YRDDNSLIEE QSGNDLARLK LAIKYRQKEF 310 320 330 340 350 360 VAQPNCQQLL ASRWYDEFPG WRRRHWAVKM VTCFIIGLLF PVFSVCYLIA PKSPLGLFIR 370 380 390 400 410 420 KPFIKFICHT ASYLTFLFLL LLASQHIDRS DLNRQGPPPT IVEWMILPWV LGFIWGEIKQ 430 440 450 460 470 480 MWDGGLQDYI HDWWNLMDFV MNSLYLATIS LKIVAFVKYS ALNPRESWDM WHPTLVAEAL 490 500 510 520 530 540 FAIANIFSSL RLISLFTANS HLGPLQISLG RMLLDILKFL FIYCLVLLAF ANGLNQLYFY 550 560 570 580 590 600 YEETKGLTCK GIRCEKQNNA FSTLFETLQS LFWSIFGLIN LYVTNVKAQH EFTEFVGATM 610 620 630 640 650 660 FGTYNVISLV VLLNMLIAMM NNSYQLIADH ADIEWKFART KLWMSYFEEG GTLPTPFNVI 670 680 690 700 710 720 PSPKSLWYLI KWIWTHLCKK KMRRKPESFG TIGRRAADNL RRHHQYQEVM RNLVKRYVAA 730 740 750 760 770 780 MIRDAKTEEG LTEENFKELK QDISSFRFEV LGLLRGSKLS TIQSANASKE SSNSADSDEK 790 800 810 820 830 840 SDSEGNSKDK KKNFSLFDLT TLIHPRSAAI ASERHNISNG SALVVQEPPR EKQRKVNFVT 850 860 870 880 890 900 DIKNFGLFHR RSKQNAAEQN ANQIFSVSEE VARQQAAGPL ERNIQLESRG LASRGDLSIP 910 920 930 940 950 960 GLSEQCVLVD HRERNTDTLG LQVGKRVCPF KSEKVVVEDT VPIIPKEKHA KEEDSSVDYD 970 LNLPDTVTHE DYVTTRL

References

[1]	"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: PCR rescued clones EMBL AAI05642.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	BC105641 mRNA. Translation: AAI05642.1.
IPI	IPI00643379.
UniGene	Hs.262960
3D structure databases
ModBase	Search...
Genome annotation databases
Ensembl	ENSG00000133107. Homo sapiens. [Contig view]
Organism-specific databases
HGNC	HGNC:12336. TRPC4.
GenAtlas	Search...
Phylogenomic databases
HOVERGEN	Q2M2U7.
Gene expression databases
ArrayExpress	Q2M2U7.
Bgee	Q2M2U7.
Family and domain databases
InterPro	IPR002110. ANK. IPR005821. Ion_trans. IPR018130. Ribosomal_S2_CS. IPR002153. Trans_rcpt. IPR013555. TRP_2. IPR004729. TRP_channel. IPR005460. TRP_channel4. [Graphical view]
Gene3D	G3DSA:1.25.40.20. ANK. 1 hit.
Pfam	PF00023. Ank. 2 hits. PF00520. Ion_trans. 1 hit. PF08344. TRP_2. 1 hit. [Graphical view]
PRINTS	PR01097. TRNSRECEPTRP. PR01645. TRPCHANNEL4.
SMART	SM00248. ANK. 2 hits. [Graphical view]
TIGRFAMs	TIGR00870. trp. 1 hit.
PROSITE	PS50297. ANK_REP_REGION. 1 hit. PS50088. ANK_REPEAT. 1 hit. PS00962. RIBOSOMAL_S2_1. 1 hit. Uncertain. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q2M2U7_HUMAN

Accession

Primary (citable) accession number: Q2M2U7

Entry history

Integrated into UniProtKB/TrEMBL:	February 21, 2006
Last sequence update:	February 21, 2006
Last modified:	March 3, 2009
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)