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Protein
Submitted name:

Oxidase (Cytochrome c) assembly 1-like

Gene

OXA1L

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Oxidase (Cytochrome c) assembly 1-likeImported
Gene namesi
Name:OXA1LImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

  • Membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei198 – 22023HelicalSequence analysisAdd
BLAST
Transmembranei277 – 29418HelicalSequence analysisAdd
BLAST
Transmembranei322 – 34120HelicalSequence analysisAdd
BLAST
Transmembranei362 – 38019HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA32854.

PTM / Processingi

Proteomic databases

MaxQBiQ2M1J6.
PaxDbiQ2M1J6.
PRIDEiQ2M1J6.

PTM databases

iPTMnetiQ2M1J6.

Expressioni

Gene expression databases

GenevisibleiQ2M1J6. HS.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000285848.

Family & Domainsi

Sequence similaritiesi

Belongs to the OXA1/ALB3/YidC family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG1239. Eukaryota.
COG0706. LUCA.
HOGENOMiHOG000046915.
HOVERGENiHBG053388.
KOiK03217.

Family and domain databases

InterProiIPR028055. Membr_insert_YidC/Oxa1_C.
IPR001708. Membrane_insert_OXA1/ALB3/YidC.
[Graphical view]
PANTHERiPTHR12428. PTHR12428. 1 hit.
PfamiPF02096. 60KD_IMP. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03592. yidC_oxa1_cterm. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2M1J6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVTWLYRFLP TSNMAAKLRS LLPPDLRLQF WLHARLQKCF LSRGCGSYCA
60 70 80 90 100
GAKASPLPGK MAMGLMCGRR ELLRLLQSGR RVHSVAGPSQ WLGKPLTTRL
110 120 130 140 150
LFPVAPCCCR PHYLFLAASG PRSLSTSAIS FAEVQVQAPP VVAATPSPTA
160 170 180 190 200
VPEVASGETA DVVQTAAEQS FAELGLGSYT PVGLIQNLLE FMHVDLGLPW
210 220 230 240 250
WGAIAACTVF ARCLIFPLIV TGQREAARIH NHLPEIQKFS SRIREAKLAG
260 270 280 290 300
DHIEYYKASS EMALYQKKHG IKLYKPLILP VTQAPIFISF FIALREMANL
310 320 330 340 350
PVPSLQTGGL WWFQDLTVSD PIYILPLAVT ATMWAVLELG AETGVQSSDL
360 370 380 390 400
QWMRNVIRMM PLITLPITMH FPTAVFMYWL SSNLFSLVQV SCLRIPAVRT
410 420 430 440 450
VLKIPQRVVH DLDKLPPREG FLESFKKGWK NAEMTRQLRE REQRMRNQLE
460 470 480 490
LAARGPLRQT FTHNPLLQPG KDNPPNIPSS SSSKPKSKYP WHDTLG
Length:496
Mass (Da):55,385
Last modified:February 21, 2006 - v1
Checksum:i8C46271F2083728A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC112331 mRNA. Translation: AAI12332.1.
RefSeqiNP_005006.3. NM_005015.3.
UniGeneiHs.151134.

Genome annotation databases

GeneIDi5018.
KEGGihsa:5018.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC112331 mRNA. Translation: AAI12332.1.
RefSeqiNP_005006.3. NM_005015.3.
UniGeneiHs.151134.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000285848.

PTM databases

iPTMnetiQ2M1J6.

Proteomic databases

MaxQBiQ2M1J6.
PaxDbiQ2M1J6.
PRIDEiQ2M1J6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi5018.
KEGGihsa:5018.

Organism-specific databases

CTDi5018.
PharmGKBiPA32854.

Phylogenomic databases

eggNOGiKOG1239. Eukaryota.
COG0706. LUCA.
HOGENOMiHOG000046915.
HOVERGENiHBG053388.
KOiK03217.

Miscellaneous databases

ChiTaRSiOXA1L. human.
GenomeRNAii5018.
NextBioi19320.

Gene expression databases

GenevisibleiQ2M1J6. HS.

Family and domain databases

InterProiIPR028055. Membr_insert_YidC/Oxa1_C.
IPR001708. Membrane_insert_OXA1/ALB3/YidC.
[Graphical view]
PANTHERiPTHR12428. PTHR12428. 1 hit.
PfamiPF02096. 60KD_IMP. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03592. yidC_oxa1_cterm. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].

Entry informationi

Entry nameiQ2M1J6_HUMAN
AccessioniPrimary (citable) accession number: Q2M1J6
Entry historyi
Integrated into UniProtKB/TrEMBL: February 21, 2006
Last sequence update: February 21, 2006
Last modified: March 16, 2016
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.