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Q2M1J3

- Q2M1J3_HUMAN

UniProt

Q2M1J3 - Q2M1J3_HUMAN

Protein
Submitted name:

ROBO1 protein

Gene

ROBO1

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 66 (01 Oct 2014)
      Sequence version 1 (21 Feb 2006)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ROBO1 proteinImported
    Gene namesi
    Name:ROBO1Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Proteomic databases

    PRIDEiQ2M1J3.

    Expressioni

    Gene expression databases

    ArrayExpressiQ2M1J3.
    BgeeiQ2M1J3.

    Structurei

    3D structure databases

    ProteinModelPortaliQ2M1J3.
    SMRiQ2M1J3. Positions 22-227, 418-528.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    RepeatSAAS annotation, Transmembrane, Transmembrane helixSAAS annotation

    Phylogenomic databases

    HOGENOMiHOG000010267.
    HOVERGENiHBG073476.

    Family and domain databases

    Gene3Di2.60.40.10. 9 hits.
    InterProiIPR003961. Fibronectin_type3.
    IPR007110. Ig-like_dom.
    IPR013783. Ig-like_fold.
    IPR013098. Ig_I-set.
    IPR003598. Ig_sub2.
    IPR003596. Ig_V-set_subgr.
    [Graphical view]
    PfamiPF00041. fn3. 3 hits.
    PF07679. I-set. 5 hits.
    [Graphical view]
    SMARTiSM00060. FN3. 3 hits.
    SM00408. IGc2. 4 hits.
    SM00406. IGv. 1 hit.
    [Graphical view]
    SUPFAMiSSF49265. SSF49265. 2 hits.
    PROSITEiPS50853. FN3. 3 hits.
    PS50835. IG_LIKE. 5 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q2M1J3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIAEPAHFYL FGLICLCSGS RLRQEDFPPR IVEHPSDLIV SKGEPATLNC     50
    KAEGRPTPTI EWYKGGERVE TDKDDPRSHR MLLPSGSLFF LRIVHGRKSR 100
    PDEGVYVCVA RNYLGEAVSH NASLEVAILR DDFRQNPSDV MVAVGEPAVM 150
    ECQPPRGHPE PTISWKKDGS PLDDKDERIT IRGGKLMITY TRKSDAGKYV 200
    CVGTNMVGER ESEVAELTVL ERPSFVKRPS NLAVTVDDSA EFKCEARGDP 250
    VPTVRWRKDD GELPKSRYEI RDDHTLKIRK VTAGDMGSYT CVAENMVGKA 300
    EASATLTVQV GSEPPHFVVK PRDQVVALGR TVTFQCEATG NPQPAIFWRR 350
    EGSQNLLFSY QPPQSSSRFS VSQTGDLTIT NVQRSDVGYY ICQTLNVAGS 400
    IITKAYLEVT DVIADRPPPV IRQGPVNQTV AVDGTFVLSC VATGSPVPTI 450
    LWRKDGVLVS TQDSRIKQLE NGVLQIRYAK LGDTGRYTCI ASTPSGEATW 500
    SAYIEVQEFG VPVQPPRPTD PNLIPSAPSK PEVTDVSRNT VTLSWQPNLN 550
    SGATPTSYII EAFSHASGSS WQTVAENVKT ETSAIKGLKP NAIYLFLVRA 600
    ANAYGISDPS QISDPVKTQD VLPTSQGVDH KQVQRELGNA VLHLHNPTVL 650
    SSSSIEVHWT VDQQSQYIQG YKILYRPSGA NHGESDWLVF EVRTPAKNSV 700
    VIPDLRKGVN YEIKARPFFN EFQGADSEIK FAKTLEEAPS APPQGVTVSK 750
    NDGNGTAILV SWQPPPEDTQ NGMVQEYKVW CLGNETRYHI NKTVDGSTFS 800
    VVIPFLVPGI RYSVEVAAST GAGSGVKSEP QFIQLDAHGN PVSPEDQVSL 850
    AQQISDVVKQ PAFIAGIGAA CWIILMVFSI WLYRHRKKRN GLTSTYAGIR 900
    KVTYQRGGEA VSSGGRPGLL NISEPAAQPW LADTWPNTGN NHNDCSISCC 950
    TAGNGNSDSN LTTYSRPADC IANYNNQLDN KQTNLMLPES TVYGDVDLSN 1000
    KINEMKTFNS PNLKDGRFVN PSGQPTPYAT TQLIQSNLSN NMNNGSGDSG 1050
    EKHWKPLGQQ KQEVAPVQYN IVEQNKLNKD YRANDTVPPT IPYNQSYDQN 1100
    TGGSYNSSDR GSSTSGSQGH KKGGARTPKV PKQGGMNWAD LLPPPPAHPP 1150
    PHSNSEEYNI SVDESYDQEM PCPVPPARMY LQQDELEEEE DERGPTPPVR 1200
    GAASSPAAVS YSHQSTATLT PSPQEELQPM LQDCPEETGH MQHQPDRRRQ 1250
    PVSPPPPPRP ISPPHTYGYI SGPLVSDMDT DAPEEEEDEA DMEVAKMQTR 1300
    RLLLRGLEQT PASSVGDLES SVTGSMINGW GSASEEDNIS SGRSSVSSSD 1350
    GSFFTDADFA QAVAAAAEYA GLKVARRQMQ DAAGRRHFHA SQCPRPTSPV 1400
    STDSNMSAAV MQKTRPAKKL KHQPGHLRRE TYTDDLPPPP VPPPAIKSPT 1450
    AQSKTQLEVR PVVVPKLPSM DARTDRSSDR KGSSYKGREV LDGRQVVDMR 1500
    TNPGDPREAQ EQQNDGKGRG NKAAKRDLPP AKTHLIQEDI LPYCRPTFPT 1550
    SNNPRDPSSS SSMSSRGSGS RQREQANVGR RNIAEMQVLG GYERGEDNNE 1600
    ELEETES 1607
    Length:1,607
    Mass (Da):175,893
    Last modified:February 21, 2006 - v1
    Checksum:i19F15DB1F218810B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC112336 mRNA. Translation: AAI12337.1.
    UniGeneiHs.744218.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC112336 mRNA. Translation: AAI12337.1 .
    UniGenei Hs.744218.

    3D structure databases

    ProteinModelPortali Q2M1J3.
    SMRi Q2M1J3. Positions 22-227, 418-528.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi Q2M1J3.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Phylogenomic databases

    HOGENOMi HOG000010267.
    HOVERGENi HBG073476.

    Miscellaneous databases

    ChiTaRSi ROBO1. human.

    Gene expression databases

    ArrayExpressi Q2M1J3.
    Bgeei Q2M1J3.

    Family and domain databases

    Gene3Di 2.60.40.10. 9 hits.
    InterProi IPR003961. Fibronectin_type3.
    IPR007110. Ig-like_dom.
    IPR013783. Ig-like_fold.
    IPR013098. Ig_I-set.
    IPR003598. Ig_sub2.
    IPR003596. Ig_V-set_subgr.
    [Graphical view ]
    Pfami PF00041. fn3. 3 hits.
    PF07679. I-set. 5 hits.
    [Graphical view ]
    SMARTi SM00060. FN3. 3 hits.
    SM00408. IGc2. 4 hits.
    SM00406. IGv. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49265. SSF49265. 2 hits.
    PROSITEi PS50853. FN3. 3 hits.
    PS50835. IG_LIKE. 5 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].

    Entry informationi

    Entry nameiQ2M1J3_HUMAN
    AccessioniPrimary (citable) accession number: Q2M1J3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 21, 2006
    Last sequence update: February 21, 2006
    Last modified: October 1, 2014
    This is version 66 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.