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Q2M1J3 (Q2M1J3_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:ROBO1 EMBL AAI12337.1
OrganismHomo sapiens (Human) EMBL AAI12337.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length1607 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q2M1J3 [UniParc].

Last modified February 21, 2006. Version 1.
Checksum: 19F15DB1F218810B

FASTA1,607175,893
        10         20         30         40         50         60 
MIAEPAHFYL FGLICLCSGS RLRQEDFPPR IVEHPSDLIV SKGEPATLNC KAEGRPTPTI 

        70         80         90        100        110        120 
EWYKGGERVE TDKDDPRSHR MLLPSGSLFF LRIVHGRKSR PDEGVYVCVA RNYLGEAVSH 

       130        140        150        160        170        180 
NASLEVAILR DDFRQNPSDV MVAVGEPAVM ECQPPRGHPE PTISWKKDGS PLDDKDERIT 

       190        200        210        220        230        240 
IRGGKLMITY TRKSDAGKYV CVGTNMVGER ESEVAELTVL ERPSFVKRPS NLAVTVDDSA 

       250        260        270        280        290        300 
EFKCEARGDP VPTVRWRKDD GELPKSRYEI RDDHTLKIRK VTAGDMGSYT CVAENMVGKA 

       310        320        330        340        350        360 
EASATLTVQV GSEPPHFVVK PRDQVVALGR TVTFQCEATG NPQPAIFWRR EGSQNLLFSY 

       370        380        390        400        410        420 
QPPQSSSRFS VSQTGDLTIT NVQRSDVGYY ICQTLNVAGS IITKAYLEVT DVIADRPPPV 

       430        440        450        460        470        480 
IRQGPVNQTV AVDGTFVLSC VATGSPVPTI LWRKDGVLVS TQDSRIKQLE NGVLQIRYAK 

       490        500        510        520        530        540 
LGDTGRYTCI ASTPSGEATW SAYIEVQEFG VPVQPPRPTD PNLIPSAPSK PEVTDVSRNT 

       550        560        570        580        590        600 
VTLSWQPNLN SGATPTSYII EAFSHASGSS WQTVAENVKT ETSAIKGLKP NAIYLFLVRA 

       610        620        630        640        650        660 
ANAYGISDPS QISDPVKTQD VLPTSQGVDH KQVQRELGNA VLHLHNPTVL SSSSIEVHWT 

       670        680        690        700        710        720 
VDQQSQYIQG YKILYRPSGA NHGESDWLVF EVRTPAKNSV VIPDLRKGVN YEIKARPFFN 

       730        740        750        760        770        780 
EFQGADSEIK FAKTLEEAPS APPQGVTVSK NDGNGTAILV SWQPPPEDTQ NGMVQEYKVW 

       790        800        810        820        830        840 
CLGNETRYHI NKTVDGSTFS VVIPFLVPGI RYSVEVAAST GAGSGVKSEP QFIQLDAHGN 

       850        860        870        880        890        900 
PVSPEDQVSL AQQISDVVKQ PAFIAGIGAA CWIILMVFSI WLYRHRKKRN GLTSTYAGIR 

       910        920        930        940        950        960 
KVTYQRGGEA VSSGGRPGLL NISEPAAQPW LADTWPNTGN NHNDCSISCC TAGNGNSDSN 

       970        980        990       1000       1010       1020 
LTTYSRPADC IANYNNQLDN KQTNLMLPES TVYGDVDLSN KINEMKTFNS PNLKDGRFVN 

      1030       1040       1050       1060       1070       1080 
PSGQPTPYAT TQLIQSNLSN NMNNGSGDSG EKHWKPLGQQ KQEVAPVQYN IVEQNKLNKD 

      1090       1100       1110       1120       1130       1140 
YRANDTVPPT IPYNQSYDQN TGGSYNSSDR GSSTSGSQGH KKGGARTPKV PKQGGMNWAD 

      1150       1160       1170       1180       1190       1200 
LLPPPPAHPP PHSNSEEYNI SVDESYDQEM PCPVPPARMY LQQDELEEEE DERGPTPPVR 

      1210       1220       1230       1240       1250       1260 
GAASSPAAVS YSHQSTATLT PSPQEELQPM LQDCPEETGH MQHQPDRRRQ PVSPPPPPRP 

      1270       1280       1290       1300       1310       1320 
ISPPHTYGYI SGPLVSDMDT DAPEEEEDEA DMEVAKMQTR RLLLRGLEQT PASSVGDLES 

      1330       1340       1350       1360       1370       1380 
SVTGSMINGW GSASEEDNIS SGRSSVSSSD GSFFTDADFA QAVAAAAEYA GLKVARRQMQ 

      1390       1400       1410       1420       1430       1440 
DAAGRRHFHA SQCPRPTSPV STDSNMSAAV MQKTRPAKKL KHQPGHLRRE TYTDDLPPPP 

      1450       1460       1470       1480       1490       1500 
VPPPAIKSPT AQSKTQLEVR PVVVPKLPSM DARTDRSSDR KGSSYKGREV LDGRQVVDMR 

      1510       1520       1530       1540       1550       1560 
TNPGDPREAQ EQQNDGKGRG NKAAKRDLPP AKTHLIQEDI LPYCRPTFPT SNNPRDPSSS 

      1570       1580       1590       1600 
SSMSSRGSGS RQREQANVGR RNIAEMQVLG GYERGEDNNE ELEETES 

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC112336 mRNA. Translation: AAI12337.1.
UniGeneHs.744218.

3D structure databases

ProteinModelPortalQ2M1J3.
SMRQ2M1J3. Positions 22-227, 418-528.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ2M1J3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOGENOMHOG000010267.
HOVERGENHBG073476.

Gene expression databases

ArrayExpressQ2M1J3.
BgeeQ2M1J3.

Family and domain databases

Gene3D2.60.40.10. 9 hits.
InterProIPR003961. Fibronectin_type3.
IPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR013098. Ig_I-set.
IPR003598. Ig_sub2.
IPR003596. Ig_V-set_subgr.
[Graphical view]
PfamPF00041. fn3. 3 hits.
PF07679. I-set. 5 hits.
[Graphical view]
SMARTSM00060. FN3. 3 hits.
SM00408. IGc2. 4 hits.
SM00406. IGv. 1 hit.
[Graphical view]
SUPFAMSSF49265. SSF49265. 2 hits.
PROSITEPS50853. FN3. 3 hits.
PS50835. IG_LIKE. 5 hits.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSROBO1. human.

Entry information

Entry nameQ2M1J3_HUMAN
AccessionPrimary (citable) accession number: Q2M1J3
Entry history
Integrated into UniProtKB/TrEMBL: February 21, 2006
Last sequence update: February 21, 2006
Last modified: March 19, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.